DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LDIFFE
Uniprot ID:
Q16515
Source protein:
Acid-sensing ion channel 2
Source gene:
ASIC2
Class:
LIG_APCC_ABBA_1
Location:
405:410
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5132
ASA_SCORE:
40.15
COIL:
0.1435
CONS_SCORE:
0.6031
DSS_SCORE:
0.0114
HELIX:
0.0295
FCONS_SCORE:
1.2472
RIG_SCORE:
1.0279
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L410I
TCGA-AX-A05Z
UCEC
TCGA
LDIFFE
LIG_APCC_ABBA_1
0.7174
p.L410I
DO40884
UCEC
ICGC
LDIFFE
LIG_APCC_ABBA_1
0.7174
p.L410F
TCGA-D3-A5GO
SKCM
TCGA
LDIFFE
LIG_APCC_ABBA_1
0.6981
p.L412R
DO7801
COAD
ICGC
LDIFFE
LIG_APCC_ABBA_1
0.2778
p.G399C
DO231778
LINC
ICGC
LDIFFE
LIG_APCC_ABBA_1
0.1667
p.D405E
DO45293
LIRI
ICGC
LDIFFE
LIG_APCC_ABBA_1
0.6758
p.R419C
SIDM00958
Chronic Myelogenous Leukemia
GDSC
LDIFFE
LIG_APCC_ABBA_1
0.0833
p.R419C
CML-T1
haematopoietic_and_lymphoid_tissue
COSMIC
LDIFFE
LIG_APCC_ABBA_1
0.0833
p.T418A
SIDM01175
Other Sarcomas
GDSC
LDIFFE
LIG_APCC_ABBA_1
0.1111
p.T418A
SW684
soft_tissue
COSMIC
LDIFFE
LIG_APCC_ABBA_1
0.1111
p.A402T
SIDM00318
Kidney Carcinoma
GDSC
LDIFFE
LIG_APCC_ABBA_1
0.25
p.A402T
VMRC-RCW
kidney
COSMIC
LDIFFE
LIG_APCC_ABBA_1
0.25
p.K404R
SIDM00172
Head and Neck Carcinoma
GDSC
LDIFFE
LIG_APCC_ABBA_1
0.3056
p.K404R
BB30-HNC
upper_aerodigestive_tract
COSMIC
LDIFFE
LIG_APCC_ABBA_1
0.3056
p.P414A
SIDM00884
Breast Carcinoma
GDSC
LDIFFE
LIG_APCC_ABBA_1
0.2222
p.P414A
HCC1395
breast
COSMIC
LDIFFE
LIG_APCC_ABBA_1
0.2222
p.E395A
SIDM01770
Gastric Carcinoma
GDSC
LDIFFE
LIG_APCC_ABBA_1
0.0556
p.L405R
ACH-000025
Brain Cancer
CCLE
LDIFFE
LIG_APCC_ABBA_1
0.8428
Drug responses associated with ASIC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDIFFE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16515
Acid-sensing ion channel 2
LIG_APCC_ABBA_1
405:410
LDIFFE
APC,CDC20,FZR1
0.5132
More...