DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LDKTPPPS
Uniprot ID:
Q9P2D1
Source protein:
Chromodomain-helicase-DNA-binding protein 7
Source gene:
CHD7
Class:
DEG_SCF_FBW7_1
Location:
727:734
E3 ligase:
FBXW7
DEGRON score:
0.995
ASA_SCORE:
103.15
COIL:
0.9516
CONS_SCORE:
0.3749
DSS_SCORE:
0.8922
HELIX:
0.0438
FCONS_SCORE:
1.19
RIG_SCORE:
0.4928
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N724K
TCGA-CR-7380
HNSC
TCGA
LDKTPPPS
DEG_SCF_FBW7_1
0.25
p.N724K
DO14734
HNSC
ICGC
LDKTPPPS
DEG_SCF_FBW7_1
0.25
p.E741K
TCGA-LP-A5U2
CESC
TCGA
LDKTPPPS
DEG_SCF_FBW7_1
0.1389
p.E741K
DO51610
CESC
ICGC
LDKTPPPS
DEG_SCF_FBW7_1
0.1389
p.P733S
DO229502
SKCA
ICGC
LDKTPPPS
DEG_SCF_FBW7_1
0.5641
p.T730I
SIDM00232
Kidney Carcinoma
GDSC
LDKTPPPS
DEG_SCF_FBW7_1
0.8189
p.T730I
ACH-002168
Kidney Cancer
CCLE
LDKTPPPS
DEG_SCF_FBW7_1
0.8189
p.T730I
NCC021
kidney
COSMIC
LDKTPPPS
DEG_SCF_FBW7_1
0.8189
p.G744S
SIDM00393
Gastric Carcinoma
GDSC
LDKTPPPS
DEG_SCF_FBW7_1
0.0556
p.G744S
SIDM00032
Bladder Carcinoma
GDSC
LDKTPPPS
DEG_SCF_FBW7_1
0.0556
p.G744S
SIDM01173
Rhabdomyosarcoma
GDSC
LDKTPPPS
DEG_SCF_FBW7_1
0.0556
p.D728H
SIDM00183
Small Cell Lung Carcinoma
GDSC
LDKTPPPS
DEG_SCF_FBW7_1
0.6577
p.D728H
SIDM01648
Non-Cancerous
GDSC
LDKTPPPS
DEG_SCF_FBW7_1
0.6577
p.D728H
ACH-002356
Non-Cancerous
CCLE
LDKTPPPS
DEG_SCF_FBW7_1
0.6577
Drug responses associated with CHD7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDKTPPPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P2D1
Chromodomain-helicase-DNA-binding protein 7
DEG_SCF_FBW7_1
727:734
LDKTPPPS
FBXW7
0.995
More...