DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LDLFDD
Uniprot ID:
Q8N6H7
Source protein:
ADP-ribosylation factor GTPase-activating protein 2
Source gene:
ARFGAP2
Class:
LIG_APCC_ABBA_1
Location:
342:347
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9232
ASA_SCORE:
66.5833
COIL:
0.6205
CONS_SCORE:
0.2215
DSS_SCORE:
0.4356
HELIX:
0.2935
FCONS_SCORE:
0.7705
RIG_SCORE:
0.7838
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A352T
TCGA-A5-A0G2
UCEC
TCGA
LDLFDD
LIG_APCC_ABBA_1
0.1944
p.P332S
TCGA-AP-A059
UCEC
TCGA
LDLFDD
LIG_APCC_ABBA_1
0.0556
p.A335V
TCGA-NJ-A4YP
LUAD
TCGA
LDLFDD
LIG_APCC_ABBA_1
0.1389
p.V333A
SIDM02059
Colorectal Carcinoma
GDSC
LDLFDD
LIG_APCC_ABBA_1
0.0833
p.R339L
SIDM00570
Gastric Carcinoma
GDSC
LDLFDD
LIG_APCC_ABBA_1
0.25
p.R339L
SIDM01449
Pancreatic Carcinoma
GDSC
LDLFDD
LIG_APCC_ABBA_1
0.25
p.R339L
SIDM01464
Pancreatic Carcinoma
GDSC
LDLFDD
LIG_APCC_ABBA_1
0.25
p.R339L
NUGC-4
stomach
COSMIC
LDLFDD
LIG_APCC_ABBA_1
0.25
p.R339H
SIDM00846
Cervical Carcinoma
GDSC
LDLFDD
LIG_APCC_ABBA_1
0.25
p.R339H
SIDM00530
Esophageal Carcinoma
GDSC
LDLFDD
LIG_APCC_ABBA_1
0.25
p.R339H
SIDM00807
Bladder Carcinoma
GDSC
LDLFDD
LIG_APCC_ABBA_1
0.25
p.R339H
SIDM00863
Burkitt's Lymphoma
GDSC
LDLFDD
LIG_APCC_ABBA_1
0.25
p.R339H
SIDM01409
Bladder Carcinoma
GDSC
LDLFDD
LIG_APCC_ABBA_1
0.25
p.S338C
SIDM00619
Thyroid Gland Carcinoma
GDSC
LDLFDD
LIG_APCC_ABBA_1
0.6667
p.S338C
ACH-002397
Thyroid Cancer
CCLE
LDLFDD
LIG_APCC_ABBA_1
0.6667
p.S338C
KMH-2
thyroid
COSMIC
LDLFDD
LIG_APCC_ABBA_1
0.6667
p.F335L
LS-411N
large_intestine
COSMIC
LDLFDD
LIG_APCC_ABBA_1
0.1389
p.P349A
KS-1
central_nervous_system
COSMIC
LDLFDD
LIG_APCC_ABBA_1
0.2778
p.S343F
LU-99A
lung
COSMIC
LDLFDD
LIG_APCC_ABBA_1
0.7982
p.A351V
MCC26
skin
COSMIC
LDLFDD
LIG_APCC_ABBA_1
0.2222
Drug responses associated with ARFGAP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDLFDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N6H7
ADP-ribosylation factor GTPase-activating protein 2
LIG_APCC_ABBA_1
342:347
LDLFDD
APC,CDC20,FZR1
0.9232
More...