DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LDLFGD
Uniprot ID:
Q9H201
Source protein:
Epsin-3
Source gene:
EPN3
Class:
LIG_APCC_ABBA_1
Location:
453:458
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9963
ASA_SCORE:
61.45
COIL:
0.8288
CONS_SCORE:
0.3306
DSS_SCORE:
0.7504
HELIX:
0.1045
FCONS_SCORE:
1.1996
RIG_SCORE:
0.6633
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S463C
TCGA-58-8386
LUSC
TCGA
LDLFGD
LIG_APCC_ABBA_1
0.1944
p.S463C
DO45537
LUSC
ICGC
LDLFGD
LIG_APCC_ABBA_1
0.1944
p.P443S
TCGA-AA-3864
COAD
TCGA
LDLFGD
LIG_APCC_ABBA_1
0.0556
p.P443S
DO8490
COAD
ICGC
LDLFGD
LIG_APCC_ABBA_1
0.0556
p.G467V
TCGA-AP-A056
UCEC
TCGA
LDLFGD
LIG_APCC_ABBA_1
0.0833
p.G467V
DO43971
UCEC
ICGC
LDLFGD
LIG_APCC_ABBA_1
0.0833
p.P459H
TCGA-AZ-6598
COAD
TCGA
LDLFGD
LIG_APCC_ABBA_1
0.3056
p.P459H
DO10276
COAD
ICGC
LDLFGD
LIG_APCC_ABBA_1
0.3056
p.S462N
TCGA-CR-6478
HNSC
TCGA
LDLFGD
LIG_APCC_ABBA_1
0.2222
p.S462N
DO15839
HNSC
ICGC
LDLFGD
LIG_APCC_ABBA_1
0.2222
p.F456L
DO8264
COAD
ICGC
LDLFGD
LIG_APCC_ABBA_1
0.6981
p.K446N
DO229004
LICA
ICGC
LDLFGD
LIG_APCC_ABBA_1
0.25
p.P450H
SIDM00789
Colorectal Carcinoma
GDSC
LDLFGD
LIG_APCC_ABBA_1
0.25
p.P450H
ACH-000997
Colon/Colorectal Cancer
CCLE
LDLFGD
LIG_APCC_ABBA_1
0.25
p.P450H
HCT-15
large_intestine
COSMIC
LDLFGD
LIG_APCC_ABBA_1
0.25
p.P461S
SIDM00529
Breast Carcinoma
GDSC
LDLFGD
LIG_APCC_ABBA_1
0.25
p.P461S
SIDM00493
Other Solid Cancers
GDSC
LDLFGD
LIG_APCC_ABBA_1
0.25
p.P461S
SIDM01525
Acute Myeloid Leukemia
GDSC
LDLFGD
LIG_APCC_ABBA_1
0.25
p.S444F
ACH-001407
Bladder Cancer
CCLE
LDLFGD
LIG_APCC_ABBA_1
0.5278
Drug responses associated with EPN3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDLFGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H201
Epsin-3
LIG_APCC_ABBA_1
453:458
LDLFGD
APC,CDC20,FZR1
0.9963
More...