DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LDLFTE
Uniprot ID:
Q8IYB5
Source protein:
Stromal membrane-associated protein 1
Source gene:
SMAP1
Class:
LIG_APCC_ABBA_1
Location:
282:287
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9367
ASA_SCORE:
80.4833
COIL:
0.6205
CONS_SCORE:
0.3618
DSS_SCORE:
0.4723
HELIX:
0.3495
FCONS_SCORE:
1.2521
RIG_SCORE:
0.8025
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L274R
TCGA-BR-8361
STAD
TCGA
LDLFTE
LIG_APCC_ABBA_1
0.1111
p.S279F
TCGA-BT-A20J
BLCA
TCGA
LDLFTE
LIG_APCC_ABBA_1
0.25
p.A272E
TCGA-VS-A8QF
CESC
TCGA
LDLFTE
LIG_APCC_ABBA_1
0.0556
p.Y282H
DO51634
CESC
ICGC
LDLFTE
LIG_APCC_ABBA_1
0.7229
p.K275T
DO234190
ESAD
ICGC
LDLFTE
LIG_APCC_ABBA_1
0.1389
p.G294V
DO26142
LUAD
ICGC
LDLFTE
LIG_APCC_ABBA_1
0.1389
p.Q289H
DO232224
PBCA
ICGC
LDLFTE
LIG_APCC_ABBA_1
0.2778
p.L273F
DO40847
UCEC
ICGC
LDLFTE
LIG_APCC_ABBA_1
0.0833
p.S280Y
DO43202
UCEC
ICGC
LDLFTE
LIG_APCC_ABBA_1
0.2778
p.S280F
DO41524
UCEC
ICGC
LDLFTE
LIG_APCC_ABBA_1
0.2778
p.T278S
SIDM00296
Small Cell Lung Carcinoma
GDSC
LDLFTE
LIG_APCC_ABBA_1
0.2222
p.T278S
ACH-002051
Lung Cancer
CCLE
LDLFTE
LIG_APCC_ABBA_1
0.2222
p.T278S
LU-134-A
lung
COSMIC
LDLFTE
LIG_APCC_ABBA_1
0.2222
p.T289A
SIDM01608
Endometrial Carcinoma
GDSC
LDLFTE
LIG_APCC_ABBA_1
0.2778
p.T289A
ACH-000990
Endometrial/Uterine Cancer
CCLE
LDLFTE
LIG_APCC_ABBA_1
0.2778
p.T292I
NCI-H69
lung
COSMIC
LDLFTE
LIG_APCC_ABBA_1
0.1944
Drug responses associated with SMAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDLFTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IYB5
Stromal membrane-associated protein 1
LIG_APCC_ABBA_1
282:287
LDLFTE
APC,CDC20,FZR1
0.9367
More...