DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LDLHRD
Uniprot ID:
O00763
Source protein:
Acetyl-CoA carboxylase 2
Source gene:
ACACB
Class:
LIG_APCC_ABBA_1
Location:
236:241
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5486
ASA_SCORE:
95.2167
COIL:
0.6823
CONS_SCORE:
0.269
DSS_SCORE:
0.3582
HELIX:
0.2863
FCONS_SCORE:
0.8543
RIG_SCORE:
0.7906
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H239N
TCGA-43-8115
LUSC
TCGA
LDLHRD
LIG_APCC_ABBA_1
0.7423
p.H239N
DO26440
LUSC
ICGC
LDLHRD
LIG_APCC_ABBA_1
0.7423
p.D241Y
TCGA-AA-3984
COAD
TCGA
LDLHRD
LIG_APCC_ABBA_1
0.7325
p.D241Y
DO9002
COAD
ICGC
LDLHRD
LIG_APCC_ABBA_1
0.7325
p.R231Q
TCGA-AA-A01R
COAD
TCGA
LDLHRD
LIG_APCC_ABBA_1
0.1944
p.R231Q
DO7934
COAD
ICGC
LDLHRD
LIG_APCC_ABBA_1
0.1944
p.R231Q
SIDM00498
Colorectal Carcinoma
GDSC
LDLHRD
LIG_APCC_ABBA_1
0.1944
p.R231Q
ACH-000970
Colon/Colorectal Cancer
CCLE
LDLHRD
LIG_APCC_ABBA_1
0.1944
p.R231Q
SNU-C5
large_intestine
COSMIC
LDLHRD
LIG_APCC_ABBA_1
0.1944
p.T243A
TCGA-AJ-A3EL
UCEC
TCGA
LDLHRD
LIG_APCC_ABBA_1
0.2778
p.T243A
DO41542
UCEC
ICGC
LDLHRD
LIG_APCC_ABBA_1
0.2778
p.E249K
TCGA-FD-A6TC
BLCA
TCGA
LDLHRD
LIG_APCC_ABBA_1
0.1111
p.E249K
TCGA-IB-7651
PAAD
TCGA
LDLHRD
LIG_APCC_ABBA_1
0.1111
p.E249K
DO49755
BLCA
ICGC
LDLHRD
LIG_APCC_ABBA_1
0.1111
p.E249K
DO46657
PAAD
ICGC
LDLHRD
LIG_APCC_ABBA_1
0.1111
p.T243N
TCGA-FG-A87Q
LGG
TCGA
LDLHRD
LIG_APCC_ABBA_1
0.2778
p.T243N
DO51830
LGG
ICGC
LDLHRD
LIG_APCC_ABBA_1
0.2778
p.A248T
TCGA-L5-A4OF
ESCA
TCGA
LDLHRD
LIG_APCC_ABBA_1
0.1389
p.A248T
SIDM01016
T-Lymphoblastic Leukemia
GDSC
LDLHRD
LIG_APCC_ABBA_1
0.1389
p.A248T
ACH-000995
Leukemia
CCLE
LDLHRD
LIG_APCC_ABBA_1
0.1389
p.A248T
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
LDLHRD
LIG_APCC_ABBA_1
0.1389
p.R231W
DO225120
BRCA
ICGC
LDLHRD
LIG_APCC_ABBA_1
0.1944
p.R231W
DO227903
BRCA
ICGC
LDLHRD
LIG_APCC_ABBA_1
0.1944
p.H239Y
DO225337
BRCA
ICGC
LDLHRD
LIG_APCC_ABBA_1
0.6118
p.A248S
DO229019
LICA
ICGC
LDLHRD
LIG_APCC_ABBA_1
0.1389
p.A248S
DO229032
LICA
ICGC
LDLHRD
LIG_APCC_ABBA_1
0.1389
p.E241K
CAL-33
upper_aerodigestive_tract
COSMIC
LDLHRD
LIG_APCC_ABBA_1
0.7022
p.E230Q
HCC1599
breast
COSMIC
LDLHRD
LIG_APCC_ABBA_1
0.1667
Drug responses associated with ACACB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDLHRD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00763
Acetyl-CoA carboxylase 2
LIG_APCC_ABBA_1
236:241
LDLHRD
APC,CDC20,FZR1
0.5486
More...