DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LDLTPVKS
Uniprot ID:
Q8N4X5
Source protein:
Actin filament-associated protein 1-like 2
Source gene:
AFAP1L2
Class:
DEG_SCF_FBW7_1
Location:
538:545
E3 ligase:
FBXW7
DEGRON score:
0.9993
ASA_SCORE:
73.15
COIL:
0.769
CONS_SCORE:
0.4857
DSS_SCORE:
0.4668
HELIX:
0.1589
FCONS_SCORE:
1.4176
RIG_SCORE:
0.7749
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R535Q
TCGA-CV-7568
HNSC
TCGA
LDLTPVKS
DEG_SCF_FBW7_1
0.25
p.R535Q
SIDM01943
Colorectal Carcinoma
GDSC
LDLTPVKS
DEG_SCF_FBW7_1
0.25
p.P550S
TCGA-EA-A3HQ
CESC
TCGA
LDLTPVKS
DEG_SCF_FBW7_1
0.1944
p.P550S
DO6317
CESC
ICGC
LDLTPVKS
DEG_SCF_FBW7_1
0.1944
p.H548N
DO228974
LICA
ICGC
LDLTPVKS
DEG_SCF_FBW7_1
0.25
p.R551C
DO47317
SKCM
ICGC
LDLTPVKS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with AFAP1L2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDLTPVKS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N4X5
Actin filament-associated protein 1-like 2
DEG_SCF_FBW7_1
538:545
LDLTPVKS
FBXW7
0.9993
More...