DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
LDMFDD
Uniprot ID:
P43694
Source protein:
Transcription factor GATA-4
Source gene:
GATA4
Class:
LIG_APCC_ABBA_1
Location:
205:210
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.879
ASA_SCORE:
63.9
COIL:
0.77
CONS_SCORE:
0.2767
DSS_SCORE:
0.3356
HELIX:
0.1567
FCONS_SCORE:
0.6743
RIG_SCORE:
0.7692
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E216V
TCGA-55-8619
LUAD
TCGA
LDMFDD
LIG_APCC_ABBA_1
0.1667
p.D210A
TCGA-D3-A8GQ
SKCM
TCGA
LDMFDD
LIG_APCC_ABBA_1
0.7793
p.D210N
TCGA-EE-A2MC
SKCM
TCGA
LDMFDD
LIG_APCC_ABBA_1
0.6932
p.D210N
TCGA-IB-7651
PAAD
TCGA
LDMFDD
LIG_APCC_ABBA_1
0.6932
p.E216Q
TCGA-OL-A66I
BRCA
TCGA
LDMFDD
LIG_APCC_ABBA_1
0.1667
p.E217Q
DO44258
BRCA
ICGC
LDMFDD
LIG_APCC_ABBA_1
0.1389
p.D211N
DO52456
COCA
ICGC
LDMFDD
LIG_APCC_ABBA_1
0.3056
p.D211N
DO46657
PAAD
ICGC
LDMFDD
LIG_APCC_ABBA_1
0.3056
p.D211N
DO37559
SKCM
ICGC
LDMFDD
LIG_APCC_ABBA_1
0.3056
p.D211Y
DO229018
LICA
ICGC
LDMFDD
LIG_APCC_ABBA_1
0.3056
p.P203H
DO25189
LUAD
ICGC
LDMFDD
LIG_APCC_ABBA_1
0.2778
p.E217V
DO26102
LUAD
ICGC
LDMFDD
LIG_APCC_ABBA_1
0.1389
p.E217D
DO232045
ORCA
ICGC
LDMFDD
LIG_APCC_ABBA_1
0.1389
p.D211A
DO51246
SKCM
ICGC
LDMFDD
LIG_APCC_ABBA_1
0.3056
p.R195Q
ACH-000982
Colon/Colorectal Cancer
CCLE
LDMFDD
LIG_APCC_ABBA_1
0.0556
p.R195Q
ACH-001345
Colon/Colorectal Cancer
CCLE
LDMFDD
LIG_APCC_ABBA_1
0.0556
p.P203S
ACH-001973
Metastasis
CCLE
LDMFDD
LIG_APCC_ABBA_1
0.2778
p.D219N
MHH-CALL-4
haematopoietic_and_lymphoid_tissue
COSMIC
LDMFDD
LIG_APCC_ABBA_1
0.0833
p.P201Q
SKG-IIIa
cervix
COSMIC
LDMFDD
LIG_APCC_ABBA_1
0.2222
p.P201Q
A4-Fuk
haematopoietic_and_lymphoid_tissue
COSMIC
LDMFDD
LIG_APCC_ABBA_1
0.2222
Drug responses associated with GATA4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDMFDD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P43694
Transcription factor GATA-4
LIG_APCC_ABBA_1
205:210
LDMFDD
APC,CDC20,FZR1
0.879
More...