DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LDPHGD
Uniprot ID:
O95402
Source protein:
Mediator of RNA polymerase II transcription subunit 26
Source gene:
MED26
Class:
LIG_APCC_ABBA_1
Location:
582:587
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6791
ASA_SCORE:
66.6833
COIL:
0.7667
CONS_SCORE:
0.5892
DSS_SCORE:
0.1375
HELIX:
0.0495
FCONS_SCORE:
0.8262
RIG_SCORE:
0.7627
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.W576C
TCGA-B5-A1MX
UCEC
TCGA
LDPHGD
LIG_APCC_ABBA_1
0.1667
p.W576C
DO41999
UCEC
ICGC
LDPHGD
LIG_APCC_ABBA_1
0.1667
p.D588N
TCGA-DK-A3IL
BLCA
TCGA
LDPHGD
LIG_APCC_ABBA_1
0.3056
p.D588N
DO555
BLCA
ICGC
LDPHGD
LIG_APCC_ABBA_1
0.3056
p.D583N
DO230334
COCA
ICGC
LDPHGD
LIG_APCC_ABBA_1
0.5821
p.N572K
DO228948
LICA
ICGC
LDPHGD
LIG_APCC_ABBA_1
0.0556
p.P584Q
DO229019
LICA
ICGC
LDPHGD
LIG_APCC_ABBA_1
0.7035
p.T577K
DO229041
LICA
ICGC
LDPHGD
LIG_APCC_ABBA_1
0.1944
p.R590H
DO29760
OV
ICGC
LDPHGD
LIG_APCC_ABBA_1
0.25
p.I593V
SIDM00043
Head and Neck Carcinoma
GDSC
LDPHGD
LIG_APCC_ABBA_1
0.1667
p.I593V
SIDM01149
Small Cell Lung Carcinoma
GDSC
LDPHGD
LIG_APCC_ABBA_1
0.1667
p.I593V
SIDM00794
Other Solid Cancers
GDSC
LDPHGD
LIG_APCC_ABBA_1
0.1667
p.I593V
SIDM00059
Ovarian Carcinoma
GDSC
LDPHGD
LIG_APCC_ABBA_1
0.1667
p.I593V
SIDM01696
Mesothelioma
GDSC
LDPHGD
LIG_APCC_ABBA_1
0.1667
Drug responses associated with MED26 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDPHGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95402
Mediator of RNA polymerase II transcription subunit 26
LIG_APCC_ABBA_1
582:587
LDPHGD
APC,CDC20,FZR1
0.6791
More...