DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LDPYTE
Uniprot ID:
Q5JVL4
Source protein:
EF-hand domain-containing protein 1
Source gene:
EFHC1
Class:
LIG_APCC_ABBA_1
Location:
209:214
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6497
ASA_SCORE:
84.6667
COIL:
0.6013
CONS_SCORE:
0.6297
DSS_SCORE:
0.464
HELIX:
0.3787
FCONS_SCORE:
1.1316
RIG_SCORE:
0.7941
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R216Q
TCGA-CA-6718
COAD
TCGA
LDPYTE
LIG_APCC_ABBA_1
0.2778
p.R216Q
TCGA-E6-A1LX
UCEC
TCGA
LDPYTE
LIG_APCC_ABBA_1
0.2778
p.R216Q
DO7801
COAD
ICGC
LDPYTE
LIG_APCC_ABBA_1
0.2778
p.R216Q
DO229493
LAML
ICGC
LDPYTE
LIG_APCC_ABBA_1
0.2778
p.R216Q
DO41020
UCEC
ICGC
LDPYTE
LIG_APCC_ABBA_1
0.2778
p.R221C
TCGA-D9-A6EC
SKCM
TCGA
LDPYTE
LIG_APCC_ABBA_1
0.1389
p.L220F
TCGA-DK-A6B6
BLCA
TCGA
LDPYTE
LIG_APCC_ABBA_1
0.1667
p.L220F
DO48576
BLCA
ICGC
LDPYTE
LIG_APCC_ABBA_1
0.1667
p.C220Y
DO47833
STAD
ICGC
LDPYTE
LIG_APCC_ABBA_1
0.1667
p.E200Q
SIDM01953
Colorectal Carcinoma
GDSC
LDPYTE
LIG_APCC_ABBA_1
0.0833
p.R221H
SIDM00967
Ovarian Carcinoma
GDSC
LDPYTE
LIG_APCC_ABBA_1
0.1389
p.R221H
SIDM00529
Breast Carcinoma
GDSC
LDPYTE
LIG_APCC_ABBA_1
0.1389
p.R221H
SIDM00844
Burkitt's Lymphoma
GDSC
LDPYTE
LIG_APCC_ABBA_1
0.1389
p.R221H
SIDM00257
Neuroblastoma
GDSC
LDPYTE
LIG_APCC_ABBA_1
0.1389
p.R221H
SIDM00785
Acute Myeloid Leukemia
GDSC
LDPYTE
LIG_APCC_ABBA_1
0.1389
Drug responses associated with EFHC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDPYTE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5JVL4
EF-hand domain-containing protein 1
LIG_APCC_ABBA_1
209:214
LDPYTE
APC,CDC20,FZR1
0.6497
More...