DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LDQTPGSS
Uniprot ID:
Q9HCK4
Source protein:
Roundabout homolog 2
Source gene:
ROBO2
Class:
DEG_SCF_FBW7_1
Location:
1237:1244
E3 ligase:
FBXW7
DEGRON score:
0.9984
ASA_SCORE:
68.7125
COIL:
0.8351
CONS_SCORE:
0.4246
DSS_SCORE:
0.65
HELIX:
0.1041
FCONS_SCORE:
1.2704
RIG_SCORE:
0.6126
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1254E
TCGA-33-4532
LUSC
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.0556
p.E1229Q
TCGA-49-AARE
LUAD
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.1111
p.D1238N
TCGA-A5-A0G2
UCEC
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.5821
p.D1254G
TCGA-A5-A0G2
UCEC
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.0556
p.T1230M
TCGA-AA-A00N
COAD
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.1389
p.D1239N
TCGA-AA-A00N
COAD
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.6932
p.D1239N
TCGA-LH-A9QB
SKCM
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.6932
p.E1245A
TCGA-AA-A02Y
COAD
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.3056
p.D1254V
TCGA-B9-A69E
KIRP
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.0556
p.L1228F
TCGA-CA-6717
COAD
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.0833
p.E1229K
TCGA-EE-A2M6
SKCM
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.1111
p.E1229K
TCGA-GN-A26C
SKCM
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.1111
p.L1250M
TCGA-ER-A2NH
SKCM
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.1667
p.D1231N
TCGA-FR-A7U9
SKCM
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.1667
p.E1240K
TCGA-VQ-A8P2
STAD
TCGA
LDQTPGSS
DEG_SCF_FBW7_1
0.7022
p.E1229A
DO7858
COAD
ICGC
LDQTPGSS
DEG_SCF_FBW7_1
0.1111
p.D1238G
DO222798
COCA
ICGC
LDQTPGSS
DEG_SCF_FBW7_1
0.6087
p.D1238G
DO41235
UCEC
ICGC
LDQTPGSS
DEG_SCF_FBW7_1
0.6087
p.D1238V
DO44513
KIRP
ICGC
LDQTPGSS
DEG_SCF_FBW7_1
0.6674
p.A1236S
DO229028
LICA
ICGC
LDQTPGSS
DEG_SCF_FBW7_1
0.3056
p.D1238E
DO26626
LUSC
ICGC
LDQTPGSS
DEG_SCF_FBW7_1
0.5647
p.P1241S
DO37406
SKCM
ICGC
LDQTPGSS
DEG_SCF_FBW7_1
0.6752
p.L1234M
DO47683
SKCM
ICGC
LDQTPGSS
DEG_SCF_FBW7_1
0.25
p.D1236Y
SIDM00477
Esophageal Carcinoma
GDSC
LDQTPGSS
DEG_SCF_FBW7_1
0.3056
p.D1236Y
OE33
oesophagus
COSMIC
LDQTPGSS
DEG_SCF_FBW7_1
0.3056
p.P1249L
SIDM00795
Melanoma
GDSC
LDQTPGSS
DEG_SCF_FBW7_1
0.1944
p.P1249L
A375
skin
COSMIC
LDQTPGSS
DEG_SCF_FBW7_1
0.1944
p.D1227Y
SIDM01218
Other Solid Cancers
GDSC
LDQTPGSS
DEG_SCF_FBW7_1
0.0556
p.D1227Y
JEG-3
placenta
COSMIC
LDQTPGSS
DEG_SCF_FBW7_1
0.0556
p.P1233L
ACH-000219
Skin Cancer
CCLE
LDQTPGSS
DEG_SCF_FBW7_1
0.2222
p.P1233L
ACH-002001
Skin Cancer
CCLE
LDQTPGSS
DEG_SCF_FBW7_1
0.2222
p.P1233L
ACH-002002
Skin Cancer
CCLE
LDQTPGSS
DEG_SCF_FBW7_1
0.2222
p.P1233L
ACH-002003
Skin Cancer
CCLE
LDQTPGSS
DEG_SCF_FBW7_1
0.2222
p.P1233L
A375
skin
COSMIC
LDQTPGSS
DEG_SCF_FBW7_1
0.2222
p.P1241L
ACH-000963
Colon/Colorectal Cancer
CCLE
LDQTPGSS
DEG_SCF_FBW7_1
0.7582
p.P1241L
CCK-81
large_intestine
COSMIC
LDQTPGSS
DEG_SCF_FBW7_1
0.7582
Drug responses associated with ROBO2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDQTPGSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HCK4
Roundabout homolog 2
DEG_SCF_FBW7_1
1237:1244
LDQTPGSS
FBXW7
0.9984
More...