DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LDTPATS
Uniprot ID:
Q8N5U6
Source protein:
RING finger protein 10
Source gene:
RNF10
Class:
DEG_SCF_FBW7_1
Location:
776:782
E3 ligase:
FBXW7
DEGRON score:
0.9662
ASA_SCORE:
83.5143
COIL:
0.9051
CONS_SCORE:
0.2371
DSS_SCORE:
0.5493
HELIX:
0.0714
FCONS_SCORE:
0.8267
RIG_SCORE:
0.7004
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S786F
TCGA-95-7944
LUAD
TCGA
LDTPATS
DEG_SCF_FBW7_1
0.6667
p.S786F
DO25163
LUAD
ICGC
LDTPATS
DEG_SCF_FBW7_1
0.6667
p.A780T
TCGA-AX-A3FT
UCEC
TCGA
LDTPATS
DEG_SCF_FBW7_1
0.6028
p.A780T
DO40801
UCEC
ICGC
LDTPATS
DEG_SCF_FBW7_1
0.6028
p.A780T
ACH-000998
Colon/Colorectal Cancer
CCLE
LDTPATS
DEG_SCF_FBW7_1
0.6028
p.A780T
CW-2
large_intestine
COSMIC
LDTPATS
DEG_SCF_FBW7_1
0.6028
p.S786C
TCGA-ZB-A96V
THYM
TCGA
LDTPATS
DEG_SCF_FBW7_1
0.6667
p.S766I
DO228971
LICA
ICGC
LDTPATS
DEG_SCF_FBW7_1
0.0556
p.I774L
SIDM00773
Non-Cancerous
GDSC
LDTPATS
DEG_SCF_FBW7_1
0.2778
p.I774L
SIDM00774
Breast Carcinoma
GDSC
LDTPATS
DEG_SCF_FBW7_1
0.2778
p.A785T
SIDM00282
Colorectal Carcinoma
GDSC
LDTPATS
DEG_SCF_FBW7_1
0.25
p.A785T
CW-2
large_intestine
COSMIC
LDTPATS
DEG_SCF_FBW7_1
0.25
p.L790P
SIDM00282
Colorectal Carcinoma
GDSC
LDTPATS
DEG_SCF_FBW7_1
0.1111
p.L790P
CW-2
large_intestine
COSMIC
LDTPATS
DEG_SCF_FBW7_1
0.1111
p.L785P
ACH-000998
Colon/Colorectal Cancer
CCLE
LDTPATS
DEG_SCF_FBW7_1
0.25
p.L785P
CW-2
large_intestine
COSMIC
LDTPATS
DEG_SCF_FBW7_1
0.25
Drug responses associated with RNF10 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDTPATS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N5U6
RING finger protein 10
DEG_SCF_FBW7_1
776:782
LDTPATS
FBXW7
0.9662
More...