DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LDTTPYSS
Uniprot ID:
A1L4H1
Source protein:
Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
Source gene:
SSC5D
Class:
DEG_SCF_FBW7_1
Location:
1127:1134
E3 ligase:
FBXW7
DEGRON score:
0.9248
ASA_SCORE:
78.225
COIL:
0.8205
CONS_SCORE:
0.3978
DSS_SCORE:
0.7494
HELIX:
0.06
FCONS_SCORE:
-0.0022
RIG_SCORE:
0.6448
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y1139H
DO23610
LUAD
ICGC
LDTTPYSS
DEG_SCF_FBW7_1
0.1944
p.S1140F
SIDM01002
Breast Carcinoma
GDSC
LDTTPYSS
DEG_SCF_FBW7_1
0.1667
p.S1140F
ACH-000117
Breast Cancer
CCLE
LDTTPYSS
DEG_SCF_FBW7_1
0.1667
p.S1140F
EFM-192A
breast
COSMIC
LDTTPYSS
DEG_SCF_FBW7_1
0.1667
p.S1140Y
ACH-001846
Bile Duct Cancer
CCLE
LDTTPYSS
DEG_SCF_FBW7_1
0.1667
Drug responses associated with SSC5D mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDTTPYSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1L4H1
Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D
DEG_SCF_FBW7_1
1127:1134
LDTTPYSS
FBXW7
0.9248
More...