DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LDVFSE
Uniprot ID:
Q9Y6X0
Source protein:
SET-binding protein
Source gene:
SETBP1
Class:
LIG_APCC_ABBA_1
Location:
1278:1283
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9749
ASA_SCORE:
76.2167
COIL:
0.5112
CONS_SCORE:
0.6298
DSS_SCORE:
0.5833
HELIX:
0.4373
FCONS_SCORE:
1.1181
RIG_SCORE:
0.7514
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V1280L
TCGA-33-4566
LUSC
TCGA
LDVFSE
LIG_APCC_ABBA_1
0.5654
p.V1280L
TCGA-58-8391
LUSC
TCGA
LDVFSE
LIG_APCC_ABBA_1
0.5654
p.V1280L
DO26790
LUSC
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.5654
p.V1280L
DO45440
LUSC
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.5654
p.S1272T
TCGA-44-2656
LUAD
TCGA
LDVFSE
LIG_APCC_ABBA_1
0.6111
p.S1272T
DO26052
LUAD
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.6111
p.S1287L
TCGA-AP-A0LM
UCEC
TCGA
LDVFSE
LIG_APCC_ABBA_1
0.2222
p.S1287L
TCGA-AX-A06F
UCEC
TCGA
LDVFSE
LIG_APCC_ABBA_1
0.2222
p.S1287L
DO43306
UCEC
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.2222
p.S1287L
DO41752
UCEC
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.2222
p.S1287P
TCGA-AX-A1CE
UCEC
TCGA
LDVFSE
LIG_APCC_ABBA_1
0.2222
p.S1287P
DO42280
UCEC
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.2222
p.T1273M
TCGA-EO-A22U
UCEC
TCGA
LDVFSE
LIG_APCC_ABBA_1
0.6389
p.T1273M
DO43755
UCEC
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.6389
p.G1268V
TCGA-MP-A4TK
LUAD
TCGA
LDVFSE
LIG_APCC_ABBA_1
0.0556
p.G1268V
DO45384
LUAD
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.0556
p.S1282R
TCGA-WE-AAA0
SKCM
TCGA
LDVFSE
LIG_APCC_ABBA_1
0.6316
p.S1282R
DO51294
SKCM
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.6316
p.G1268R
DO234464
ESAD
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.0556
p.G1268R
DO35083
PACA
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.0556
p.G1268R
ACH-001410
Bladder Cancer
CCLE
LDVFSE
LIG_APCC_ABBA_1
0.0556
p.D1289N
DO233845
GACA
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.1667
p.E1276D
DO233941
GACA
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.2778
p.S1293G
DO44883
LIHC
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.0556
p.P1286S
DO27943
ORCA
ICGC
LDVFSE
LIG_APCC_ABBA_1
0.25
Drug responses associated with SETBP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDVFSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y6X0
SET-binding protein
LIG_APCC_ABBA_1
1278:1283
LDVFSE
APC,CDC20,FZR1
0.9749
More...