DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LDVHAE
Uniprot ID:
Q9Y6G9
Source protein:
Cytoplasmic dynein 1 light intermediate chain 1
Source gene:
DYNC1LI1
Class:
LIG_APCC_ABBA_1
Location:
493:498
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9964
ASA_SCORE:
78.65
COIL:
0.3788
CONS_SCORE:
0.4144
DSS_SCORE:
0.6489
HELIX:
0.5882
FCONS_SCORE:
1.217
RIG_SCORE:
0.7765
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D500Y
TCGA-AP-A1DV
UCEC
TCGA
LDVHAE
LIG_APCC_ABBA_1
0.2778
p.G488C
TCGA-BF-A1PZ
SKCM
TCGA
LDVHAE
LIG_APCC_ABBA_1
0.1944
p.R504Q
TCGA-BR-8680
STAD
TCGA
LDVHAE
LIG_APCC_ABBA_1
0.1667
p.R501K
TCGA-F5-6814
READ
TCGA
LDVHAE
LIG_APCC_ABBA_1
0.25
Drug responses associated with DYNC1LI1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LDVHAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y6G9
Cytoplasmic dynein 1 light intermediate chain 1
LIG_APCC_ABBA_1
493:498
LDVHAE
APC,CDC20,FZR1
0.9964
More...