DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LEDVTPKK
Uniprot ID:
Q9Y2M0
Source protein:
Fanconi-associated nuclease 1
Source gene:
FAN1
Class:
DEG_SCF_SKP2-CKS1_1
Location:
94:101
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9818
ASA_SCORE:
112.3625
COIL:
0.8696
CONS_SCORE:
0.2403
DSS_SCORE:
0.5825
HELIX:
0.1084
FCONS_SCORE:
1.0496
RIG_SCORE:
0.7086
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V92I
TCGA-A6-6653
COAD
TCGA
LEDVTPKK
DEG_SCF_SKP2-CKS1_1
0.2778
p.V92I
DO10373
COAD
ICGC
LEDVTPKK
DEG_SCF_SKP2-CKS1_1
0.2778
p.P99S
TCGA-AX-A1CE
UCEC
TCGA
LEDVTPKK
DEG_SCF_SKP2-CKS1_1
0.6752
p.P99S
DO42280
UCEC
ICGC
LEDVTPKK
DEG_SCF_SKP2-CKS1_1
0.6752
p.V97I
TCGA-D1-A0ZP
UCEC
TCGA
LEDVTPKK
DEG_SCF_SKP2-CKS1_1
0.5965
p.V97I
DO42233
UCEC
ICGC
LEDVTPKK
DEG_SCF_SKP2-CKS1_1
0.5965
p.M86I
TCGA-FS-A1ZN
SKCM
TCGA
LEDVTPKK
DEG_SCF_SKP2-CKS1_1
0.1111
p.M86I
DO38165
SKCM
ICGC
LEDVTPKK
DEG_SCF_SKP2-CKS1_1
0.1111
p.T93A
SIDM00660
Colorectal Carcinoma
GDSC
LEDVTPKK
DEG_SCF_SKP2-CKS1_1
0.3056
p.T93A
ACH-000985
Colon/Colorectal Cancer
CCLE
LEDVTPKK
DEG_SCF_SKP2-CKS1_1
0.3056
p.T93A
LS-411N
large_intestine
COSMIC
LEDVTPKK
DEG_SCF_SKP2-CKS1_1
0.3056
Drug responses associated with FAN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LEDVTPKK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y2M0
Fanconi-associated nuclease 1
DEG_SCF_SKP2-CKS1_1
94:101
LEDVTPKK
SKP2,CSK1
0.9818
More...