DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LEETPVIE
Uniprot ID:
Q15154
Source protein:
Pericentriolar material 1 protein
Source gene:
PCM1
Class:
DEG_SCF_FBW7_2
Location:
1562:1569
E3 ligase:
FBXW7
DEGRON score:
0.963
ASA_SCORE:
98.5625
COIL:
0.7773
CONS_SCORE:
0.283
DSS_SCORE:
0.5814
HELIX:
0.1524
FCONS_SCORE:
0.7922
RIG_SCORE:
0.7742
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1571C
TCGA-06-5416
GBM
TCGA
LEETPVIE
DEG_SCF_FBW7_2
0.2778
p.R1571C
DO10880
GBM
ICGC
LEETPVIE
DEG_SCF_FBW7_2
0.2778
p.S1578G
TCGA-BR-8589
STAD
TCGA
LEETPVIE
DEG_SCF_FBW7_2
0.5278
p.S1578G
DO47813
STAD
ICGC
LEETPVIE
DEG_SCF_FBW7_2
0.5278
p.G1556S
SIDM00529
Breast Carcinoma
GDSC
LEETPVIE
DEG_SCF_FBW7_2
0.1667
p.T1558R
SIDM00085
Glioma
GDSC
LEETPVIE
DEG_SCF_FBW7_2
0.6667
p.T1558R
ACH-000655
Brain Cancer
CCLE
LEETPVIE
DEG_SCF_FBW7_2
0.6667
p.T1558R
SF268
central_nervous_system
COSMIC
LEETPVIE
DEG_SCF_FBW7_2
0.6667
p.E1569G
SIDM00999
Bladder Carcinoma
GDSC
LEETPVIE
DEG_SCF_FBW7_2
0.7199
p.E1569G
639-V
urinary_tract
COSMIC
LEETPVIE
DEG_SCF_FBW7_2
0.7199
p.E1561G
ACH-000973
Bladder Cancer
CCLE
LEETPVIE
DEG_SCF_FBW7_2
0.3056
p.E1561G
639-V
urinary_tract
COSMIC
LEETPVIE
DEG_SCF_FBW7_2
0.3056
p.P1558S
ACH-002055
Lymphoma
CCLE
LEETPVIE
DEG_SCF_FBW7_2
0.6667
p.M1558I
COLO-783
skin
COSMIC
LEETPVIE
DEG_SCF_FBW7_2
0.6667
Drug responses associated with PCM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LEETPVIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15154
Pericentriolar material 1 protein
DEG_SCF_FBW7_2
1562:1569
LEETPVIE
FBXW7
0.963
More...