DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LEMTPYNT
Uniprot ID:
Q14C86
Source protein:
GTPase-activating protein and VPS9 domain-containing protein 1
Source gene:
GAPVD1
Class:
DEG_SCF_FBW7_1
Location:
455:462
E3 ligase:
FBXW7
DEGRON score:
0.9937
ASA_SCORE:
80.8875
COIL:
0.8668
CONS_SCORE:
0.3441
DSS_SCORE:
0.6604
HELIX:
0.0595
FCONS_SCORE:
0.8825
RIG_SCORE:
0.6387
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P471L
TCGA-DK-AA6S
BLCA
TCGA
LEMTPYNT
DEG_SCF_FBW7_1
0.0833
p.P471L
DO219007
BLCA
ICGC
LEMTPYNT
DEG_SCF_FBW7_1
0.0833
p.Q464H
DO229045
LICA
ICGC
LEMTPYNT
DEG_SCF_FBW7_1
0.2778
p.P459L
DO222702
MELA
ICGC
LEMTPYNT
DEG_SCF_FBW7_1
0.7582
p.M457I
SIDM01068
Non-Small Cell Lung Carcinoma
GDSC
LEMTPYNT
DEG_SCF_FBW7_1
0.6507
p.M457I
ACH-000562
Lung Cancer
CCLE
LEMTPYNT
DEG_SCF_FBW7_1
0.6507
p.M457I
HCC-78
lung
COSMIC
LEMTPYNT
DEG_SCF_FBW7_1
0.6507
p.N461S
SIDM00254
Neuroblastoma
GDSC
LEMTPYNT
DEG_SCF_FBW7_1
0.5958
p.N461S
SIDM01710
Squamous Cell Lung Carcinoma
GDSC
LEMTPYNT
DEG_SCF_FBW7_1
0.5958
Drug responses associated with GAPVD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LEMTPYNT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14C86
GTPase-activating protein and VPS9 domain-containing protein 1
DEG_SCF_FBW7_1
455:462
LEMTPYNT
FBXW7
0.9937
More...