DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LEPFFE
Uniprot ID:
Q13562
Source protein:
Neurogenic differentiation factor 1
Source gene:
NEUROD1
Class:
LIG_APCC_ABBA_1
Location:
253:258
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9645
ASA_SCORE:
68.5
COIL:
0.7567
CONS_SCORE:
0.3782
DSS_SCORE:
0.3832
HELIX:
0.1667
FCONS_SCORE:
1.0765
RIG_SCORE:
0.7582
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E254K
TCGA-85-A4CL
LUSC
TCGA
LEPFFE
LIG_APCC_ABBA_1
0.591
p.E254K
DO45454
LUSC
ICGC
LEPFFE
LIG_APCC_ABBA_1
0.591
p.T265S
TCGA-AF-3913
READ
TCGA
LEPFFE
LIG_APCC_ABBA_1
0.1389
p.T265S
DO36846
READ
ICGC
LEPFFE
LIG_APCC_ABBA_1
0.1389
p.A252T
TCGA-EO-A22X
UCEC
TCGA
LEPFFE
LIG_APCC_ABBA_1
0.3056
p.A252T
DO43907
UCEC
ICGC
LEPFFE
LIG_APCC_ABBA_1
0.3056
p.D263E
TCGA-EW-A1PG
BRCA
TCGA
LEPFFE
LIG_APCC_ABBA_1
0.1944
p.D263E
DO3698
BRCA
ICGC
LEPFFE
LIG_APCC_ABBA_1
0.1944
p.A251T
TCGA-F5-6814
READ
TCGA
LEPFFE
LIG_APCC_ABBA_1
0.2778
p.A251T
DO233156
GACA
ICGC
LEPFFE
LIG_APCC_ABBA_1
0.2778
p.A251T
DO36556
READ
ICGC
LEPFFE
LIG_APCC_ABBA_1
0.2778
p.H247Q
DO228952
LICA
ICGC
LEPFFE
LIG_APCC_ABBA_1
0.1667
p.Y249H
DO48761
LIRI
ICGC
LEPFFE
LIG_APCC_ABBA_1
0.2222
p.P246Q
SIDM00653
Small Cell Lung Carcinoma
GDSC
LEPFFE
LIG_APCC_ABBA_1
0.1389
p.P246Q
ACH-000514
Lung Cancer
CCLE
LEPFFE
LIG_APCC_ABBA_1
0.1389
p.P246Q
NCI-H1092
lung
COSMIC
LEPFFE
LIG_APCC_ABBA_1
0.1389
p.P255H
SIDM00927
Small Cell Lung Carcinoma
GDSC
LEPFFE
LIG_APCC_ABBA_1
0.7694
p.P255H
ACH-000871
Lung Cancer
CCLE
LEPFFE
LIG_APCC_ABBA_1
0.7694
p.P255H
NCI-H510A
lung
COSMIC
LEPFFE
LIG_APCC_ABBA_1
0.7694
Drug responses associated with NEUROD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LEPFFE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13562
Neurogenic differentiation factor 1
LIG_APCC_ABBA_1
253:258
LEPFFE
APC,CDC20,FZR1
0.9645
More...