DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LEPHID
Uniprot ID:
Q8TF05
Source protein:
Serine/threonine-protein phosphatase 4 regulatory subunit 1
Source gene:
PPP4R1
Class:
LIG_APCC_ABBA_1
Location:
514:519
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8747
ASA_SCORE:
83.3667
COIL:
0.7892
CONS_SCORE:
0.4156
DSS_SCORE:
0.5492
HELIX:
0.1853
FCONS_SCORE:
1.099
RIG_SCORE:
0.7379
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N513T
TCGA-49-AARN
LUAD
TCGA
LEPHID
LIG_APCC_ABBA_1
0.3056
p.K524E
TCGA-D1-A174
UCEC
TCGA
LEPHID
LIG_APCC_ABBA_1
0.3056
p.A515V
DO233864
GACA
ICGC
LEPHID
LIG_APCC_ABBA_1
0.6936
p.A516T
DO21571
LAML
ICGC
LEPHID
LIG_APCC_ABBA_1
0.7139
p.S521R
DO229019
LICA
ICGC
LEPHID
LIG_APCC_ABBA_1
0.2778
p.R518H
DO38427
STAD
ICGC
LEPHID
LIG_APCC_ABBA_1
0.8244
p.R518H
DO43891
UCEC
ICGC
LEPHID
LIG_APCC_ABBA_1
0.8244
p.V523I
SIDM00985
Burkitt's Lymphoma
GDSC
LEPHID
LIG_APCC_ABBA_1
0.2222
p.V523I
SIDM00799
Glioblastoma
GDSC
LEPHID
LIG_APCC_ABBA_1
0.2222
Drug responses associated with PPP4R1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LEPHID
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TF05
Serine/threonine-protein phosphatase 4 regulatory subunit 1
LIG_APCC_ABBA_1
514:519
LEPHID
APC,CDC20,FZR1
0.8747
More...