DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LEPYSE
Uniprot ID:
O15259
Source protein:
Nephrocystin-1
Source gene:
NPHP1
Class:
LIG_APCC_ABBA_1
Location:
207:212
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7676
ASA_SCORE:
67.2333
COIL:
0.437
CONS_SCORE:
0.3517
DSS_SCORE:
0.6634
HELIX:
0.0742
FCONS_SCORE:
0.8815
RIG_SCORE:
0.7219
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P209S
TCGA-AP-A1DK
UCEC
TCGA
LEPYSE
LIG_APCC_ABBA_1
0.6752
p.L201R
TCGA-D9-A6EC
SKCM
TCGA
LEPYSE
LIG_APCC_ABBA_1
0.1667
p.G216D
TCGA-EB-A24D
SKCM
TCGA
LEPYSE
LIG_APCC_ABBA_1
0.2222
p.G197V
TCGA-EO-A3B0
UCEC
TCGA
LEPYSE
LIG_APCC_ABBA_1
0.0556
p.T198I
DO41999
UCEC
ICGC
LEPYSE
LIG_APCC_ABBA_1
0.0833
p.S211G
SIDM00241
Breast Carcinoma
GDSC
LEPYSE
LIG_APCC_ABBA_1
0.5882
p.S211G
ACH-002179
Breast Cancer
CCLE
LEPYSE
LIG_APCC_ABBA_1
0.5882
p.S211G
OCUB-M
breast
COSMIC
LEPYSE
LIG_APCC_ABBA_1
0.5882
p.T216M
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
LEPYSE
LIG_APCC_ABBA_1
0.2222
Drug responses associated with NPHP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LEPYSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15259
Nephrocystin-1
LIG_APCC_ABBA_1
207:212
LEPYSE
APC,CDC20,FZR1
0.7676
More...