DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LERTPSPE
Uniprot ID:
Q9Y2I1
Source protein:
Nischarin
Source gene:
NISCH
Class:
DEG_SCF_FBW7_2
Location:
1279:1286
E3 ligase:
FBXW7
DEGRON score:
0.9549
ASA_SCORE:
89.6875
COIL:
0.8603
CONS_SCORE:
0.4832
DSS_SCORE:
0.3496
HELIX:
0.1064
FCONS_SCORE:
1.0831
RIG_SCORE:
0.6841
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V1275M
TCGA-AP-A0LM
UCEC
TCGA
LERTPSPE
DEG_SCF_FBW7_2
0.2222
p.V1275M
DO43306
UCEC
ICGC
LERTPSPE
DEG_SCF_FBW7_2
0.2222
p.S1277A
TCGA-CC-A7IE
LIHC
TCGA
LERTPSPE
DEG_SCF_FBW7_2
0.2778
p.S1277A
DO52175
LIHC
ICGC
LERTPSPE
DEG_SCF_FBW7_2
0.2778
p.S1278Y
TCGA-DK-A2I1
BLCA
TCGA
LERTPSPE
DEG_SCF_FBW7_2
0.3056
p.S1278Y
DO444
BLCA
ICGC
LERTPSPE
DEG_SCF_FBW7_2
0.3056
p.K1290N
TCGA-EC-A1QX
UCEC
TCGA
LERTPSPE
DEG_SCF_FBW7_2
0.6667
p.K1290N
DO42592
UCEC
ICGC
LERTPSPE
DEG_SCF_FBW7_2
0.6667
p.F1296L
TCGA-EY-A1GI
UCEC
TCGA
LERTPSPE
DEG_SCF_FBW7_2
0.0556
p.F1296L
DO41211
UCEC
ICGC
LERTPSPE
DEG_SCF_FBW7_2
0.0556
p.P1283L
TCGA-QB-AA9O
SKCM
TCGA
LERTPSPE
DEG_SCF_FBW7_2
0.7582
p.P1283L
DO51267
SKCM
ICGC
LERTPSPE
DEG_SCF_FBW7_2
0.7582
p.S1294F
DO220906
MELA
ICGC
LERTPSPE
DEG_SCF_FBW7_2
0.5556
p.V1274A
SIDM01608
Endometrial Carcinoma
GDSC
LERTPSPE
DEG_SCF_FBW7_2
0.1944
p.V1274A
ACH-000990
Endometrial/Uterine Cancer
CCLE
LERTPSPE
DEG_SCF_FBW7_2
0.1944
Drug responses associated with NISCH mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LERTPSPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y2I1
Nischarin
DEG_SCF_FBW7_2
1279:1286
LERTPSPE
FBXW7
0.9549
More...