DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LESTPVPS
Uniprot ID:
P35658
Source protein:
Nuclear pore complex protein Nup214
Source gene:
NUP214
Class:
DEG_SCF_FBW7_1
Location:
557:564
E3 ligase:
FBXW7
DEGRON score:
0.9865
ASA_SCORE:
87.325
COIL:
0.9491
CONS_SCORE:
0.3385
DSS_SCORE:
0.433
HELIX:
0.0155
FCONS_SCORE:
1.0707
RIG_SCORE:
0.6725
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G549V
TCGA-BQ-5880
KIRP
TCGA
LESTPVPS
DEG_SCF_FBW7_1
0.1111
p.G549V
DO20754
KIRP
ICGC
LESTPVPS
DEG_SCF_FBW7_1
0.1111
p.P563S
TCGA-DK-AA76
BLCA
TCGA
LESTPVPS
DEG_SCF_FBW7_1
0.5641
p.P563S
DO219013
BLCA
ICGC
LESTPVPS
DEG_SCF_FBW7_1
0.5641
p.M572T
TCGA-VQ-A91E
STAD
TCGA
LESTPVPS
DEG_SCF_FBW7_1
0.1111
p.M572T
DO51784
STAD
ICGC
LESTPVPS
DEG_SCF_FBW7_1
0.1111
p.P568A
DO48446
BLCA
ICGC
LESTPVPS
DEG_SCF_FBW7_1
0.2222
p.P574S
DO229010
COCA
ICGC
LESTPVPS
DEG_SCF_FBW7_1
0.0556
p.P574S
DO229013
COCA
ICGC
LESTPVPS
DEG_SCF_FBW7_1
0.0556
p.P574S
DO229016
COCA
ICGC
LESTPVPS
DEG_SCF_FBW7_1
0.0556
p.P574S
DO229005
COCA
ICGC
LESTPVPS
DEG_SCF_FBW7_1
0.0556
p.P574S
DO228941
LICA
ICGC
LESTPVPS
DEG_SCF_FBW7_1
0.0556
p.P574S
DO229028
LICA
ICGC
LESTPVPS
DEG_SCF_FBW7_1
0.0556
p.E558K
SIDM01119
Other Solid Cancers
GDSC
LESTPVPS
DEG_SCF_FBW7_1
0.591
p.E558K
ACH-000775
Lung Cancer
CCLE
LESTPVPS
DEG_SCF_FBW7_1
0.591
p.E558K
NCI-H727
lung
COSMIC
LESTPVPS
DEG_SCF_FBW7_1
0.591
p.V562M
SIDM00660
Colorectal Carcinoma
GDSC
LESTPVPS
DEG_SCF_FBW7_1
0.6097
p.V562M
ACH-000985
Colon/Colorectal Cancer
CCLE
LESTPVPS
DEG_SCF_FBW7_1
0.6097
p.V562M
LS-411N
large_intestine
COSMIC
LESTPVPS
DEG_SCF_FBW7_1
0.6097
p.I570V
SIDM01134
Small Cell Lung Carcinoma
GDSC
LESTPVPS
DEG_SCF_FBW7_1
0.1667
p.I570V
ACH-000292
Lung Cancer
CCLE
LESTPVPS
DEG_SCF_FBW7_1
0.1667
p.I570V
NCI-H841
lung
COSMIC
LESTPVPS
DEG_SCF_FBW7_1
0.1667
p.S572G
CW-2
large_intestine
COSMIC
LESTPVPS
DEG_SCF_FBW7_1
0.1111
p.Y574F
NCI-H650
lung
COSMIC
LESTPVPS
DEG_SCF_FBW7_1
0.0556
p.V552I
Hs940-T
skin
COSMIC
LESTPVPS
DEG_SCF_FBW7_1
0.1944
p.S561L
RCC-ER
kidney
COSMIC
LESTPVPS
DEG_SCF_FBW7_1
0.7667
Drug responses associated with NUP214 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LESTPVPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_SCF_FBW7_1
557:564
LESTPVPS
FBXW7
0.9865
More...