DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LETPCLT
Uniprot ID:
Q8N187
Source protein:
Calcium-responsive transcription factor
Source gene:
CARF
Class:
DEG_SCF_FBW7_1
Location:
382:388
E3 ligase:
FBXW7
DEGRON score:
0.9508
ASA_SCORE:
71.0857
COIL:
0.6697
CONS_SCORE:
0.3967
DSS_SCORE:
0.3904
HELIX:
0.1379
FCONS_SCORE:
0.7406
RIG_SCORE:
0.7779
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q374H
TCGA-A5-A0G2
UCEC
TCGA
LETPCLT
DEG_SCF_FBW7_1
0.1111
p.H387N
DO223588
BLCA
ICGC
LETPCLT
DEG_SCF_FBW7_1
0.7423
p.D383N
DO225215
BRCA
ICGC
LETPCLT
DEG_SCF_FBW7_1
0.6932
p.D383N
DO227836
BRCA
ICGC
LETPCLT
DEG_SCF_FBW7_1
0.6932
p.S394F
DO222644
MELA
ICGC
LETPCLT
DEG_SCF_FBW7_1
0.1667
p.S394F
DO47255
SKCM
ICGC
LETPCLT
DEG_SCF_FBW7_1
0.1667
p.R396S
DO35424
PACA
ICGC
LETPCLT
DEG_SCF_FBW7_1
0.1111
p.I384T
DO36281
PRAD
ICGC
LETPCLT
DEG_SCF_FBW7_1
0.7078
p.S376F
DO37519
SKCM
ICGC
LETPCLT
DEG_SCF_FBW7_1
0.1667
p.P379S
DO37409
SKCM
ICGC
LETPCLT
DEG_SCF_FBW7_1
0.25
p.P395S
SIDM00189
Melanoma
GDSC
LETPCLT
DEG_SCF_FBW7_1
0.1389
p.P395S
ACH-002098
Skin Cancer
CCLE
LETPCLT
DEG_SCF_FBW7_1
0.1389
p.P395S
CP67-MEL
skin
COSMIC
LETPCLT
DEG_SCF_FBW7_1
0.1389
p.L382S
SIDM00845
Burkitt's Lymphoma
GDSC
LETPCLT
DEG_SCF_FBW7_1
0.7667
p.S398F
SIDM00193
Colorectal Carcinoma
GDSC
LETPCLT
DEG_SCF_FBW7_1
0.0556
p.S398F
ACH-000991
Colon/Colorectal Cancer
CCLE
LETPCLT
DEG_SCF_FBW7_1
0.0556
p.S398F
SNU-81
large_intestine
COSMIC
LETPCLT
DEG_SCF_FBW7_1
0.0556
p.P385R
SIDM00724
Non-Small Cell Lung Carcinoma
GDSC
LETPCLT
DEG_SCF_FBW7_1
0.7512
p.T386S
KARPAS-620
haematopoietic_and_lymphoid_tissue
COSMIC
LETPCLT
DEG_SCF_FBW7_1
0.7116
Drug responses associated with CARF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LETPCLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N187
Calcium-responsive transcription factor
DEG_SCF_FBW7_1
382:388
LETPCLT
FBXW7
0.9508
More...