DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LETPKLE
Uniprot ID:
Q8TDX9
Source protein:
Polycystic kidney disease protein 1-like 1
Source gene:
PKD1L1
Class:
DEG_SCF_FBW7_2
Location:
2771:2777
E3 ligase:
FBXW7
DEGRON score:
0.5829
ASA_SCORE:
100.9429
COIL:
0.7677
CONS_SCORE:
0.5135
DSS_SCORE:
0.1166
HELIX:
0.2186
FCONS_SCORE:
1.4565
RIG_SCORE:
0.8499
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T2767I
TCGA-AX-A0IU
UCEC
TCGA
LETPKLE
DEG_SCF_FBW7_2
0.2222
p.T2767I
DO40954
UCEC
ICGC
LETPKLE
DEG_SCF_FBW7_2
0.2222
p.E2763K
TCGA-EE-A2GJ
SKCM
TCGA
LETPKLE
DEG_SCF_FBW7_2
0.1111
p.E2763K
TCGA-QB-A6FS
SKCM
TCGA
LETPKLE
DEG_SCF_FBW7_2
0.1111
p.E2763K
DO37746
SKCM
ICGC
LETPKLE
DEG_SCF_FBW7_2
0.1111
p.E2763K
DO48654
SKCM
ICGC
LETPKLE
DEG_SCF_FBW7_2
0.1111
p.A2779T
TCGA-EE-A3JD
SKCM
TCGA
LETPKLE
DEG_SCF_FBW7_2
0.2778
p.A2779T
DO50299
SKCM
ICGC
LETPKLE
DEG_SCF_FBW7_2
0.2778
p.A2779V
TCGA-XK-AAIW
PRAD
TCGA
LETPKLE
DEG_SCF_FBW7_2
0.2778
p.A2779V
DO51407
PRAD
ICGC
LETPKLE
DEG_SCF_FBW7_2
0.2778
p.W2762L
DO5745
BRCA
ICGC
LETPKLE
DEG_SCF_FBW7_2
0.0833
p.V2765I
DO227646
COCA
ICGC
LETPKLE
DEG_SCF_FBW7_2
0.1667
p.P2774Q
DO228986
LICA
ICGC
LETPKLE
DEG_SCF_FBW7_2
0.7035
Drug responses associated with PKD1L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LETPKLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TDX9
Polycystic kidney disease protein 1-like 1
DEG_SCF_FBW7_2
2771:2777
LETPKLE
FBXW7
0.5829
More...