DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LETTPTTS
Uniprot ID:
Q96NW7
Source protein:
Leucine-rich repeat-containing protein 7
Source gene:
LRRC7
Class:
DEG_SCF_FBW7_1
Location:
862:869
E3 ligase:
FBXW7
DEGRON score:
0.8831
ASA_SCORE:
89.3875
COIL:
0.9111
CONS_SCORE:
0.5272
DSS_SCORE:
0.7099
HELIX:
0.0373
FCONS_SCORE:
1.0246
RIG_SCORE:
0.642
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S869I
TCGA-AX-A05Z
UCEC
TCGA
LETTPTTS
DEG_SCF_FBW7_1
0.7341
p.P866T
TCGA-22-5473
LUSC
TCGA
LETTPTTS
DEG_SCF_FBW7_1
0.7031
p.T867I
ACH-000807
Brain Cancer
CCLE
LETTPTTS
DEG_SCF_FBW7_1
0.5966
p.P870L
TCGA-FW-A3R5
SKCM
TCGA
LETTPTTS
DEG_SCF_FBW7_1
0.3056
p.P870S
ACH-000990
Endometrial/Uterine Cancer
CCLE
LETTPTTS
DEG_SCF_FBW7_1
0.3056
p.P875S
SIDM01608
Endometrial Carcinoma
GDSC
LETTPTTS
DEG_SCF_FBW7_1
0.2778
p.P872S
TCGA-B5-A1MR
UCEC
TCGA
LETTPTTS
DEG_SCF_FBW7_1
0.25
p.T872I
SIDM01442
Glioma
GDSC
LETTPTTS
DEG_SCF_FBW7_1
0.25
p.P872L
ACH-002027
Endometrial/Uterine Cancer
CCLE
LETTPTTS
DEG_SCF_FBW7_1
0.25
p.E873K
TCGA-GC-A3I6
BLCA
TCGA
LETTPTTS
DEG_SCF_FBW7_1
0.2222
p.A857T
TCGA-A5-A0G9
UCEC
TCGA
LETTPTTS
DEG_SCF_FBW7_1
0.1944
p.A857T
TCGA-AF-6136
READ
TCGA
LETTPTTS
DEG_SCF_FBW7_1
0.1944
p.A857T
TCGA-QR-A70N
PCPG
TCGA
LETTPTTS
DEG_SCF_FBW7_1
0.1944
p.A857T
TCGA-XK-AAIW
PRAD
TCGA
LETTPTTS
DEG_SCF_FBW7_1
0.1944
p.R855S
TCGA-37-3792
LUSC
TCGA
LETTPTTS
DEG_SCF_FBW7_1
0.1389
p.I878M
ACH-000984
Endometrial/Uterine Cancer
CCLE
LETTPTTS
DEG_SCF_FBW7_1
0.0833
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Drug responses associated with LRRC7 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LETTPTTS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96NW7
Leucine-rich repeat-containing protein 7
DEG_SCF_FBW7_1
862:869
LETTPTTS
FBXW7
0.8831
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