DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LEVFGE
Uniprot ID:
P08648
Source protein:
Integrin alpha-5
Source gene:
ITGA5
Class:
LIG_APCC_ABBA_1
Location:
657:662
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6046
ASA_SCORE:
50.5
COIL:
0.3652
CONS_SCORE:
0.4064
DSS_SCORE:
0.1108
HELIX:
0.0193
FCONS_SCORE:
0.6932
RIG_SCORE:
0.8411
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q663H
SIDM00989
Bladder Carcinoma
GDSC
LEVFGE
LIG_APCC_ABBA_1
0.3056
p.Q663H
ACH-000802
Bladder Cancer
CCLE
LEVFGE
LIG_APCC_ABBA_1
0.3056
p.Q663H
BFTC-905
urinary_tract
COSMIC
LEVFGE
LIG_APCC_ABBA_1
0.3056
p.H665D
SIDM00365
Small Cell Lung Carcinoma
GDSC
LEVFGE
LIG_APCC_ABBA_1
0.25
p.H665D
ACH-002196
Lung Cancer
CCLE
LEVFGE
LIG_APCC_ABBA_1
0.25
p.H665D
SBC-1
lung
COSMIC
LEVFGE
LIG_APCC_ABBA_1
0.25
p.V666M
SIDM00145
T-Lymphoblastic Leukemia
GDSC
LEVFGE
LIG_APCC_ABBA_1
0.2222
p.V666M
ACH-001127
Leukemia
CCLE
LEVFGE
LIG_APCC_ABBA_1
0.2222
p.V666M
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
LEVFGE
LIG_APCC_ABBA_1
0.2222
p.D670E
DO228948
LICA
ICGC
LEVFGE
LIG_APCC_ABBA_1
0.1111
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Drug responses associated with ITGA5 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LEVFGE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P08648
Integrin alpha-5
LIG_APCC_ABBA_1
657:662
LEVFGE
APC,CDC20,FZR1
0.6046
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