DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LFIFID
Uniprot ID:
P07237
Source protein:
Protein disulfide-isomerase
Source gene:
P4HB
Class:
LIG_APCC_ABBA_1
Location:
287:292
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5916
ASA_SCORE:
11.7
COIL:
0.0527
CONS_SCORE:
0.4611
DSS_SCORE:
0.097
HELIX:
0.0082
FCONS_SCORE:
1.1953
RIG_SCORE:
0.9315
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E280D
TCGA-28-2506
GBM
TCGA
LFIFID
LIG_APCC_ABBA_1
0.1389
p.E280D
DO11585
GBM
ICGC
LFIFID
LIG_APCC_ABBA_1
0.1389
p.L287M
TCGA-AY-6197
COAD
TCGA
LFIFID
LIG_APCC_ABBA_1
0.5999
p.L287M
DO9956
COAD
ICGC
LFIFID
LIG_APCC_ABBA_1
0.5999
p.R300H
TCGA-BK-A6W3
UCEC
TCGA
LFIFID
LIG_APCC_ABBA_1
0.1111
p.R300H
TCGA-BR-6452
STAD
TCGA
LFIFID
LIG_APCC_ABBA_1
0.1111
p.R300H
DO38404
STAD
ICGC
LFIFID
LIG_APCC_ABBA_1
0.1111
p.R300H
DO50076
UCEC
ICGC
LFIFID
LIG_APCC_ABBA_1
0.1111
p.R300H
SIDM00145
T-Lymphoblastic Leukemia
GDSC
LFIFID
LIG_APCC_ABBA_1
0.1111
p.R300H
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
LFIFID
LIG_APCC_ABBA_1
0.1111
p.S293R
DO229019
LICA
ICGC
LFIFID
LIG_APCC_ABBA_1
0.75
p.N298K
DO229015
LICA
ICGC
LFIFID
LIG_APCC_ABBA_1
0.1667
p.F288L
DO229045
LICA
ICGC
LFIFID
LIG_APCC_ABBA_1
0.587
p.E280K
SIDM00101
Mesothelioma
GDSC
LFIFID
LIG_APCC_ABBA_1
0.1389
p.E280K
H2591
pleura
COSMIC
LFIFID
LIG_APCC_ABBA_1
0.1389
p.D292N
SIDM01561
Melanoma
GDSC
LFIFID
LIG_APCC_ABBA_1
0.6932
p.R301L
ACH-000551
Leukemia
CCLE
LFIFID
LIG_APCC_ABBA_1
0.0833
p.R301L
ACH-002061
Leukemia
CCLE
LFIFID
LIG_APCC_ABBA_1
0.0833
p.R301L
K-562
haematopoietic_and_lymphoid_tissue
COSMIC
LFIFID
LIG_APCC_ABBA_1
0.0833
p.K282T
ACH-000970
Colon/Colorectal Cancer
CCLE
LFIFID
LIG_APCC_ABBA_1
0.1944
p.K282T
SNU-C5
large_intestine
COSMIC
LFIFID
LIG_APCC_ABBA_1
0.1944
p.E289D
ACH-001399
Colon/Colorectal Cancer
CCLE
LFIFID
LIG_APCC_ABBA_1
0.6758
p.E289D
SW626
ovary
COSMIC
LFIFID
LIG_APCC_ABBA_1
0.6758
Drug responses associated with P4HB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LFIFID
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P07237
Protein disulfide-isomerase
LIG_APCC_ABBA_1
287:292
LFIFID
APC,CDC20,FZR1
0.5916
More...