DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
LFLHLE
Uniprot ID:
Q8N5Y2
Source protein:
Male-specific lethal 3 homolog
Source gene:
MSL3
Class:
LIG_APCC_ABBA_1
Location:
384:389
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8582
ASA_SCORE:
83.2333
COIL:
0.4337
CONS_SCORE:
0.3418
DSS_SCORE:
0.6216
HELIX:
0.3657
FCONS_SCORE:
1.053
RIG_SCORE:
0.7377
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D376N
TCGA-B0-4852
KIRC
TCGA
LFLHLE
LIG_APCC_ABBA_1
0.1111
p.A379T
TCGA-B5-A3FC
UCEC
TCGA
LFLHLE
LIG_APCC_ABBA_1
0.1944
p.A379T
DO41871
UCEC
ICGC
LFLHLE
LIG_APCC_ABBA_1
0.1944
p.S399F
TCGA-BR-7717
STAD
TCGA
LFLHLE
LIG_APCC_ABBA_1
0.5
p.K391E
TCGA-DK-A1A7
BLCA
TCGA
LFLHLE
LIG_APCC_ABBA_1
0.2778
p.S380I
TCGA-DU-6392
LGG
TCGA
LFLHLE
LIG_APCC_ABBA_1
0.2222
p.S380I
DO22237
LGG
ICGC
LFLHLE
LIG_APCC_ABBA_1
0.2222
p.S391G
DO483
BLCA
ICGC
LFLHLE
LIG_APCC_ABBA_1
0.2778
p.E377Q
DO225207
BRCA
ICGC
LFLHLE
LIG_APCC_ABBA_1
0.1389
p.K396N
DO14766
HNSC
ICGC
LFLHLE
LIG_APCC_ABBA_1
0.5833
p.F393L
DO22403
LGG
ICGC
LFLHLE
LIG_APCC_ABBA_1
0.2222
p.M381I
DO229034
LICA
ICGC
LFLHLE
LIG_APCC_ABBA_1
0.25
p.T380I
DO35642
PBCA
ICGC
LFLHLE
LIG_APCC_ABBA_1
0.2222
p.P398L
DO47619
SKCM
ICGC
LFLHLE
LIG_APCC_ABBA_1
0.5278
p.S387F
DO38412
STAD
ICGC
LFLHLE
LIG_APCC_ABBA_1
0.7982
p.P391T
DO231338
THCA
ICGC
LFLHLE
LIG_APCC_ABBA_1
0.2778
p.P389H
HEC-1
endometrium
COSMIC
LFLHLE
LIG_APCC_ABBA_1
0.7694
p.P394A
SW948
large_intestine
COSMIC
LFLHLE
LIG_APCC_ABBA_1
0.1944
Drug responses associated with MSL3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LFLHLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N5Y2
Male-specific lethal 3 homolog
LIG_APCC_ABBA_1
384:389
LFLHLE
APC,CDC20,FZR1
0.8582
More...