DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
LFLHPD
Uniprot ID:
Q9NS15
Source protein:
Latent-transforming growth factor beta-binding protein 3
Source gene:
LTBP3
Class:
LIG_APCC_ABBA_1
Location:
480:485
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9729
ASA_SCORE:
69.8333
COIL:
0.7538
CONS_SCORE:
0.5556
DSS_SCORE:
0.7535
HELIX:
0.1147
FCONS_SCORE:
1.0566
RIG_SCORE:
0.6569
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E475K
TCGA-60-2714
LUSC
TCGA
LFLHPD
LIG_APCC_ABBA_1
0.1944
p.E475K
DO26530
LUSC
ICGC
LFLHPD
LIG_APCC_ABBA_1
0.1944
p.Q473K
DO228948
LICA
ICGC
LFLHPD
LIG_APCC_ABBA_1
0.1389
p.A491D
DO229026
LICA
ICGC
LFLHPD
LIG_APCC_ABBA_1
0.1667
p.D485E
DO229035
LICA
ICGC
LFLHPD
LIG_APCC_ABBA_1
0.5647
p.T471N
DO229041
LICA
ICGC
LFLHPD
LIG_APCC_ABBA_1
0.0833
p.P487T
DO229006
LICA
ICGC
LFLHPD
LIG_APCC_ABBA_1
0.2778
p.H483Y
DO228371
MALY
ICGC
LFLHPD
LIG_APCC_ABBA_1
0.6118
p.H483Y
SIDM01008
B-Cell Non-Hodgkin's Lymphoma
GDSC
LFLHPD
LIG_APCC_ABBA_1
0.6118
p.H483Y
ACH-000315
Lymphoma
CCLE
LFLHPD
LIG_APCC_ABBA_1
0.6118
p.H483Y
KARPAS-422
haematopoietic_and_lymphoid_tissue
COSMIC
LFLHPD
LIG_APCC_ABBA_1
0.6118
p.R475G
DO233295
NACA
ICGC
LFLHPD
LIG_APCC_ABBA_1
0.1944
p.F478I
DO46593
OV
ICGC
LFLHPD
LIG_APCC_ABBA_1
0.2778
p.N471T
DO219253
PRAD
ICGC
LFLHPD
LIG_APCC_ABBA_1
0.0833
Drug responses associated with LTBP3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LFLHPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NS15
Latent-transforming growth factor beta-binding protein 3
LIG_APCC_ABBA_1
480:485
LFLHPD
APC,CDC20,FZR1
0.9729
More...