DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LFTPKQE
Uniprot ID:
P04844
Source protein:
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
Source gene:
RPN2
Class:
DEG_SCF_FBW7_2
Location:
519:525
E3 ligase:
FBXW7
DEGRON score:
0.6159
ASA_SCORE:
82.2
COIL:
0.7449
CONS_SCORE:
0.5741
DSS_SCORE:
0.3505
HELIX:
0.1711
FCONS_SCORE:
0.9745
RIG_SCORE:
0.7732
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P522T
TCGA-57-1586
OV
TCGA
LFTPKQE
DEG_SCF_FBW7_2
0.7031
p.E534Q
TCGA-DI-A1NO
UCEC
TCGA
LFTPKQE
DEG_SCF_FBW7_2
0.0833
p.S512L
TCGA-DK-AA74
BLCA
TCGA
LFTPKQE
DEG_SCF_FBW7_2
0.1389
p.S512L
SIDM00411
Pancreatic Carcinoma
GDSC
LFTPKQE
DEG_SCF_FBW7_2
0.1389
p.S512L
SIDM00472
Ovarian Carcinoma
GDSC
LFTPKQE
DEG_SCF_FBW7_2
0.1389
p.S512L
SIDM01363
Squamous Cell Lung Carcinoma
GDSC
LFTPKQE
DEG_SCF_FBW7_2
0.1389
p.S512L
PEO1
ovary
COSMIC
LFTPKQE
DEG_SCF_FBW7_2
0.1389
p.T521A
TCGA-DX-AB32
SARC
TCGA
LFTPKQE
DEG_SCF_FBW7_2
0.825
p.E509K
TCGA-YC-A89H
BLCA
TCGA
LFTPKQE
DEG_SCF_FBW7_2
0.0556
p.E509K
SIDM01007
T-Lymphoblastic Leukemia
GDSC
LFTPKQE
DEG_SCF_FBW7_2
0.0556
p.E509K
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
LFTPKQE
DEG_SCF_FBW7_2
0.0556
p.A533S
DO228974
LICA
ICGC
LFTPKQE
DEG_SCF_FBW7_2
0.1111
p.V535F
DO229022
LICA
ICGC
LFTPKQE
DEG_SCF_FBW7_2
0.1667
p.R531C
SIDM01045
Endometrial Carcinoma
GDSC
LFTPKQE
DEG_SCF_FBW7_2
0.1667
p.R531C
EN
endometrium
COSMIC
LFTPKQE
DEG_SCF_FBW7_2
0.1667
p.L522F
ACH-002027
Endometrial/Uterine Cancer
CCLE
LFTPKQE
DEG_SCF_FBW7_2
0.6981
Drug responses associated with RPN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LFTPKQE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P04844
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
DEG_SCF_FBW7_2
519:525
LFTPKQE
FBXW7
0.6159
More...