DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LFTPLAT
Uniprot ID:
Q12830
Source protein:
Nucleosome-remodeling factor subunit BPTF
Source gene:
BPTF
Class:
DEG_SCF_FBW7_1
Location:
2336:2342
E3 ligase:
FBXW7
DEGRON score:
0.5099
ASA_SCORE:
97.1857
COIL:
0.8833
CONS_SCORE:
0.4601
DSS_SCORE:
0.3978
HELIX:
0.0236
FCONS_SCORE:
1.1849
RIG_SCORE:
0.8403
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S2339F
TCGA-B5-A11E
UCEC
TCGA
LFTPLAT
DEG_SCF_FBW7_1
0.7982
p.S2339F
DO41644
UCEC
ICGC
LFTPLAT
DEG_SCF_FBW7_1
0.7982
p.R2342H
TCGA-HZ-7289
PAAD
TCGA
LFTPLAT
DEG_SCF_FBW7_1
0.8244
p.R2342H
DO32793
PAAD
ICGC
LFTPLAT
DEG_SCF_FBW7_1
0.8244
p.R2352C
DO8898
COAD
ICGC
LFTPLAT
DEG_SCF_FBW7_1
0.0556
p.R2342C
SIDM00534
Colorectal Carcinoma
GDSC
LFTPLAT
DEG_SCF_FBW7_1
0.8301
p.R2342C
ACH-000986
Colon/Colorectal Cancer
CCLE
LFTPLAT
DEG_SCF_FBW7_1
0.8301
p.R2342C
HT-115
large_intestine
COSMIC
LFTPLAT
DEG_SCF_FBW7_1
0.8301
p.P2346L
Sarc9371
bone
COSMIC
LFTPLAT
DEG_SCF_FBW7_1
0.6667
p.P2333L
Sarc9371
bone
COSMIC
LFTPLAT
DEG_SCF_FBW7_1
0.25
p.A2326V
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
LFTPLAT
DEG_SCF_FBW7_1
0.0556
p.R2329C
HT-115
large_intestine
COSMIC
LFTPLAT
DEG_SCF_FBW7_1
0.1389
Drug responses associated with BPTF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LFTPLAT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12830
Nucleosome-remodeling factor subunit BPTF
DEG_SCF_FBW7_1
2336:2342
LFTPLAT
FBXW7
0.5099
More...