DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGETPLMS
Uniprot ID:
Q53GG5
Source protein:
PDZ and LIM domain protein 3
Source gene:
PDLIM3
Class:
DEG_SCF_FBW7_1
Location:
214:221
E3 ligase:
FBXW7
DEGRON score:
0.9389
ASA_SCORE:
74.575
COIL:
0.846
CONS_SCORE:
0.4266
DSS_SCORE:
0.6081
HELIX:
0.0699
FCONS_SCORE:
0.9322
RIG_SCORE:
0.672
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G215A
TCGA-09-2049
OV
TCGA
LGETPLMS
DEG_SCF_FBW7_1
0.6429
p.G215A
DO29488
OV
ICGC
LGETPLMS
DEG_SCF_FBW7_1
0.6429
p.G215W
TCGA-66-2734
LUSC
TCGA
LGETPLMS
DEG_SCF_FBW7_1
0.6714
p.G215W
DO26430
LUSC
ICGC
LGETPLMS
DEG_SCF_FBW7_1
0.6714
p.P218S
TCGA-DK-A1A3
BLCA
TCGA
LGETPLMS
DEG_SCF_FBW7_1
0.6752
p.P218S
DO558
BLCA
ICGC
LGETPLMS
DEG_SCF_FBW7_1
0.6752
p.P218S
DO52663
MALY
ICGC
LGETPLMS
DEG_SCF_FBW7_1
0.6752
p.M220L
DO1096
BRCA
ICGC
LGETPLMS
DEG_SCF_FBW7_1
0.5999
p.R219H
DO219633
BRCA
ICGC
LGETPLMS
DEG_SCF_FBW7_1
0.8244
p.R219H
DO233731
GACA
ICGC
LGETPLMS
DEG_SCF_FBW7_1
0.8244
p.A213T
DO233882
GACA
ICGC
LGETPLMS
DEG_SCF_FBW7_1
0.3056
p.R219S
DO231652
LINC
ICGC
LGETPLMS
DEG_SCF_FBW7_1
0.7427
p.T231M
DO33091
PACA
ICGC
LGETPLMS
DEG_SCF_FBW7_1
0.0556
p.P220T
ACH-000706
Lung Cancer
CCLE
LGETPLMS
DEG_SCF_FBW7_1
0.7031
p.P220T
EKVX
lung
COSMIC
LGETPLMS
DEG_SCF_FBW7_1
0.7031
Drug responses associated with PDLIM3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGETPLMS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q53GG5
PDZ and LIM domain protein 3
DEG_SCF_FBW7_1
214:221
LGETPLMS
FBXW7
0.9389
More...