DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
LGGTPTLS
Uniprot ID:
P46531
Source protein:
Neurogenic locus notch homolog protein 1
Source gene:
NOTCH1
Class:
DEG_SCF_FBW7_1
Location:
2129:2136
E3 ligase:
FBXW7
DEGRON score:
0.9991
ASA_SCORE:
76.2625
COIL:
0.9568
CONS_SCORE:
0.2514
DSS_SCORE:
0.5125
HELIX:
0.0125
FCONS_SCORE:
0.6965
RIG_SCORE:
0.6277
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P2138Q
TCGA-BF-A1Q0
SKCM
TCGA
LGGTPTLS
DEG_SCF_FBW7_1
0.2778
p.P2138Q
DO47374
SKCM
ICGC
LGGTPTLS
DEG_SCF_FBW7_1
0.2778
p.G2130W
TCGA-EE-A2ML
SKCM
TCGA
LGGTPTLS
DEG_SCF_FBW7_1
0.6714
p.G2130W
DO37408
SKCM
ICGC
LGGTPTLS
DEG_SCF_FBW7_1
0.6714
p.V2119M
TCGA-XF-AAN7
BLCA
TCGA
LGGTPTLS
DEG_SCF_FBW7_1
0.0556
p.V2119M
DO51946
BLCA
ICGC
LGGTPTLS
DEG_SCF_FBW7_1
0.0556
p.S2121R
DO228952
LICA
ICGC
LGGTPTLS
DEG_SCF_FBW7_1
0.5556
p.H2125Q
DO229015
LICA
ICGC
LGGTPTLS
DEG_SCF_FBW7_1
0.2222
p.H2125Q
SIDM01237
Hepatocellular Carcinoma
GDSC
LGGTPTLS
DEG_SCF_FBW7_1
0.2222
p.H2125Q
ACH-001021
Liver Cancer
CCLE
LGGTPTLS
DEG_SCF_FBW7_1
0.2222
p.H2125Q
ACH-001028
Rhabdoid
CCLE
LGGTPTLS
DEG_SCF_FBW7_1
0.2222
p.H2125Q
C3A
liver
COSMIC
LGGTPTLS
DEG_SCF_FBW7_1
0.2222
p.G2126R
DO228584
MALY
ICGC
LGGTPTLS
DEG_SCF_FBW7_1
0.25
p.G2126R
DO232224
PBCA
ICGC
LGGTPTLS
DEG_SCF_FBW7_1
0.25
p.G2126R
DO36386
READ
ICGC
LGGTPTLS
DEG_SCF_FBW7_1
0.25
p.P2133S
SIDM01126
Small Cell Lung Carcinoma
GDSC
LGGTPTLS
DEG_SCF_FBW7_1
0.6752
p.P2133S
SIDM00673
Breast Carcinoma
GDSC
LGGTPTLS
DEG_SCF_FBW7_1
0.6752
Drug responses associated with NOTCH1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGGTPTLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P46531
Neurogenic locus notch homolog protein 1
DEG_SCF_FBW7_1
2129:2136
LGGTPTLS
FBXW7
0.9991
More...