DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGLHLE
Uniprot ID:
Q9Y303
Source protein:
N-acetylglucosamine-6-phosphate deacetylase
Source gene:
AMDHD2
Class:
LIG_APCC_ABBA_1
Location:
138:143
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7129
ASA_SCORE:
10.0167
COIL:
0.1698
CONS_SCORE:
0.7719
DSS_SCORE:
0.4274
HELIX:
0.008
FCONS_SCORE:
1.4591
RIG_SCORE:
0.7374
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L140P
TCGA-22-5477
LUSC
TCGA
LGLHLE
LIG_APCC_ABBA_1
0.6471
p.L140P
DO26894
LUSC
ICGC
LGLHLE
LIG_APCC_ABBA_1
0.6471
p.R149W
TCGA-CG-4460
STAD
TCGA
LGLHLE
LIG_APCC_ABBA_1
0.1667
p.R149W
DO38427
STAD
ICGC
LGLHLE
LIG_APCC_ABBA_1
0.1667
p.H133N
TCGA-D3-A2J8
SKCM
TCGA
LGLHLE
LIG_APCC_ABBA_1
0.1944
p.H133N
DO37778
SKCM
ICGC
LGLHLE
LIG_APCC_ABBA_1
0.1944
p.E143D
TCGA-HU-A4GQ
STAD
TCGA
LGLHLE
LIG_APCC_ABBA_1
0.5647
p.E143D
DO47767
STAD
ICGC
LGLHLE
LIG_APCC_ABBA_1
0.5647
p.R152W
TCGA-XM-A8RF
THYM
TCGA
LGLHLE
LIG_APCC_ABBA_1
0.0833
p.G136W
DO229027
LICA
ICGC
LGLHLE
LIG_APCC_ABBA_1
0.2778
p.A135S
DO229031
LICA
ICGC
LGLHLE
LIG_APCC_ABBA_1
0.25
p.A135S
SIDM00104
Mesothelioma
GDSC
LGLHLE
LIG_APCC_ABBA_1
0.25
p.A135S
ACH-002123
Lung Cancer
CCLE
LGLHLE
LIG_APCC_ABBA_1
0.25
p.A135S
H2369
pleura
COSMIC
LGLHLE
LIG_APCC_ABBA_1
0.25
p.P132L
DO220891
MELA
ICGC
LGLHLE
LIG_APCC_ABBA_1
0.1667
p.L138F
SIDM00545
Melanoma
GDSC
LGLHLE
LIG_APCC_ABBA_1
0.587
p.L138F
ACH-000987
Skin Cancer
CCLE
LGLHLE
LIG_APCC_ABBA_1
0.587
p.I147V
SIDM00277
Acute Myeloid Leukemia
GDSC
LGLHLE
LIG_APCC_ABBA_1
0.2222
p.R149Q
SIDM01263
T-Lymphoblastic Leukemia
GDSC
LGLHLE
LIG_APCC_ABBA_1
0.1667
p.S129T
SIDM01182
Bladder Carcinoma
GDSC
LGLHLE
LIG_APCC_ABBA_1
0.0833
p.S129T
ACH-000522
Bladder Cancer
CCLE
LGLHLE
LIG_APCC_ABBA_1
0.0833
p.S129T
UM-UC-3
urinary_tract
COSMIC
LGLHLE
LIG_APCC_ABBA_1
0.0833
Drug responses associated with AMDHD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGLHLE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y303
N-acetylglucosamine-6-phosphate deacetylase
LIG_APCC_ABBA_1
138:143
LGLHLE
APC,CDC20,FZR1
0.7129
More...