DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGPFED
Uniprot ID:
Q96JG9
Source protein:
Zinc finger protein 469
Source gene:
ZNF469
Class:
LIG_APCC_ABBA_1
Location:
3033:3038
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9491
ASA_SCORE:
81.6333
COIL:
0.875
CONS_SCORE:
0.8151
DSS_SCORE:
0.3247
HELIX:
0.0315
FCONS_SCORE:
1.1058
RIG_SCORE:
0.7989
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P3033S
DO229456
SKCA
ICGC
LGPFED
LIG_APCC_ABBA_1
0.6752
p.G3034E
DO220879
MELA
ICGC
LGPFED
LIG_APCC_ABBA_1
0.6087
p.V3040M
TCGA-A6-6649
COAD
TCGA
LGPFED
LIG_APCC_ABBA_1
0.2778
p.P3040L
DO10140
COAD
ICGC
LGPFED
LIG_APCC_ABBA_1
0.2778
p.P3040S
DO41572
UCEC
ICGC
LGPFED
LIG_APCC_ABBA_1
0.2778
p.G3030S
DO230940
LUSC
ICGC
LGPFED
LIG_APCC_ABBA_1
0.25
p.G3030S
DO224584
LUSC
ICGC
LGPFED
LIG_APCC_ABBA_1
0.25
p.R3042C
DO10244
COAD
ICGC
LGPFED
LIG_APCC_ABBA_1
0.2222
p.R3042C
DO35442
PACA
ICGC
LGPFED
LIG_APCC_ABBA_1
0.2222
p.R3042C
DO46877
RECA
ICGC
LGPFED
LIG_APCC_ABBA_1
0.2222
p.R3042H
DO8642
COAD
ICGC
LGPFED
LIG_APCC_ABBA_1
0.2222
p.C3028S
DO233383
RECA
ICGC
LGPFED
LIG_APCC_ABBA_1
0.1944
p.T3044M
DO233163
GACA
ICGC
LGPFED
LIG_APCC_ABBA_1
0.1667
p.T3044M
DO233887
GACA
ICGC
LGPFED
LIG_APCC_ABBA_1
0.1667
p.E3047G
DO8479
COAD
ICGC
LGPFED
LIG_APCC_ABBA_1
0.0833
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Drug responses associated with ZNF469 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LGPFED
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JG9
Zinc finger protein 469
LIG_APCC_ABBA_1
3033:3038
LGPFED
APC,CDC20,FZR1
0.9491
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