DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGPFQD
Uniprot ID:
Q9HBT6
Source protein:
Cadherin-20
Source gene:
CDH20
Class:
LIG_APCC_ABBA_1
Location:
367:372
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8512
ASA_SCORE:
65
COIL:
0.789
CONS_SCORE:
0.6918
DSS_SCORE:
0.2756
HELIX:
0.0478
FCONS_SCORE:
1.0476
RIG_SCORE:
0.7361
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E361K
TCGA-86-8279
LUAD
TCGA
LGPFQD
LIG_APCC_ABBA_1
0.1667
p.E361K
DO24140
LUAD
ICGC
LGPFQD
LIG_APCC_ABBA_1
0.1667
p.P358T
TCGA-98-8022
LUSC
TCGA
LGPFQD
LIG_APCC_ABBA_1
0.0833
p.P358T
DO26934
LUSC
ICGC
LGPFQD
LIG_APCC_ABBA_1
0.0833
p.P358T
SIDM01768
Melanoma
GDSC
LGPFQD
LIG_APCC_ABBA_1
0.0833
p.P358T
ACH-000899
Skin Cancer
CCLE
LGPFQD
LIG_APCC_ABBA_1
0.0833
p.E361Q
TCGA-AC-A23H
BRCA
TCGA
LGPFQD
LIG_APCC_ABBA_1
0.1667
p.E361Q
DO2401
BRCA
ICGC
LGPFQD
LIG_APCC_ABBA_1
0.1667
p.E381K
TCGA-EE-A2MR
SKCM
TCGA
LGPFQD
LIG_APCC_ABBA_1
0.0833
p.E381K
DO37819
SKCM
ICGC
LGPFQD
LIG_APCC_ABBA_1
0.0833
p.P369S
TCGA-GF-A6C9
SKCM
TCGA
LGPFQD
LIG_APCC_ABBA_1
0.6752
p.P369S
DO51254
SKCM
ICGC
LGPFQD
LIG_APCC_ABBA_1
0.6752
p.N357T
TCGA-HU-A4H0
STAD
TCGA
LGPFQD
LIG_APCC_ABBA_1
0.0556
p.N357T
DO47785
STAD
ICGC
LGPFQD
LIG_APCC_ABBA_1
0.0556
p.R363H
TCGA-IB-7889
PAAD
TCGA
LGPFQD
LIG_APCC_ABBA_1
0.2222
p.R363H
DO48310
ESCA
ICGC
LGPFQD
LIG_APCC_ABBA_1
0.2222
p.R363H
DO46651
PAAD
ICGC
LGPFQD
LIG_APCC_ABBA_1
0.2222
p.R363C
TCGA-SL-A6JA
UCEC
TCGA
LGPFQD
LIG_APCC_ABBA_1
0.2222
p.R363C
DO219787
UCEC
ICGC
LGPFQD
LIG_APCC_ABBA_1
0.2222
p.I378V
DO230326
COCA
ICGC
LGPFQD
LIG_APCC_ABBA_1
0.1667
p.D372G
DO230347
COCA
ICGC
LGPFQD
LIG_APCC_ABBA_1
0.7198
p.T375R
SIDM01946
Pancreatic Carcinoma
GDSC
LGPFQD
LIG_APCC_ABBA_1
0.25
p.L367F
SIDM00845
Burkitt's Lymphoma
GDSC
LGPFQD
LIG_APCC_ABBA_1
0.587
p.L367F
ACH-000786
Lymphoma
CCLE
LGPFQD
LIG_APCC_ABBA_1
0.587
p.Q371R
SIDM00845
Burkitt's Lymphoma
GDSC
LGPFQD
LIG_APCC_ABBA_1
0.6218
p.Q371R
SIDM00878
Breast Carcinoma
GDSC
LGPFQD
LIG_APCC_ABBA_1
0.6218
p.Q371R
SIDM00793
Burkitt's Lymphoma
GDSC
LGPFQD
LIG_APCC_ABBA_1
0.6218
p.P369T
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
LGPFQD
LIG_APCC_ABBA_1
0.7031
p.P369T
ACH-000945
Lung Cancer
CCLE
LGPFQD
LIG_APCC_ABBA_1
0.7031
p.P369T
NCI-H650
lung
COSMIC
LGPFQD
LIG_APCC_ABBA_1
0.7031
Drug responses associated with CDH20 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGPFQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HBT6
Cadherin-20
LIG_APCC_ABBA_1
367:372
LGPFQD
APC,CDC20,FZR1
0.8512
More...