DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGPFSE
Uniprot ID:
P25686
Source protein:
DnaJ homolog subfamily B member 2
Source gene:
DNAJB2
Class:
LIG_APCC_ABBA_1
Location:
120:125
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9367
ASA_SCORE:
44.45
COIL:
0.8
CONS_SCORE:
0.316
DSS_SCORE:
0.41
HELIX:
0.1233
FCONS_SCORE:
0.7623
RIG_SCORE:
0.7682
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R129P
TCGA-49-AAR2
LUAD
TCGA
LGPFSE
LIG_APCC_ABBA_1
0.2222
p.R129P
DO218918
LUAD
ICGC
LGPFSE
LIG_APCC_ABBA_1
0.2222
p.G130C
TCGA-99-8025
LUAD
TCGA
LGPFSE
LIG_APCC_ABBA_1
0.1944
p.G130C
DO24255
LUAD
ICGC
LGPFSE
LIG_APCC_ABBA_1
0.1944
p.P122L
TCGA-D3-A8GI
SKCM
TCGA
LGPFSE
LIG_APCC_ABBA_1
0.6471
p.P122L
DO50284
SKCM
ICGC
LGPFSE
LIG_APCC_ABBA_1
0.6471
p.S134L
TCGA-DD-AADA
LIHC
TCGA
LGPFSE
LIG_APCC_ABBA_1
0.0833
p.S134L
DO52227
LIHC
ICGC
LGPFSE
LIG_APCC_ABBA_1
0.0833
p.S131F
TCGA-EE-A181
SKCM
TCGA
LGPFSE
LIG_APCC_ABBA_1
0.1667
p.S131F
DO37444
SKCM
ICGC
LGPFSE
LIG_APCC_ABBA_1
0.1667
p.G135V
TCGA-EO-A3B1
UCEC
TCGA
LGPFSE
LIG_APCC_ABBA_1
0.0556
p.G135V
DO52414
UCEC
ICGC
LGPFSE
LIG_APCC_ABBA_1
0.0556
p.R129W
TCGA-HU-A4H8
STAD
TCGA
LGPFSE
LIG_APCC_ABBA_1
0.2222
p.R129W
DO222800
COCA
ICGC
LGPFSE
LIG_APCC_ABBA_1
0.2222
p.R129W
DO47869
STAD
ICGC
LGPFSE
LIG_APCC_ABBA_1
0.2222
p.P112R
TCGA-XF-A8HF
BLCA
TCGA
LGPFSE
LIG_APCC_ABBA_1
0.1111
p.P112R
DO49800
BLCA
ICGC
LGPFSE
LIG_APCC_ABBA_1
0.1111
p.Q127E
TCGA-XF-AAMG
BLCA
TCGA
LGPFSE
LIG_APCC_ABBA_1
0.2778
p.Q127E
DO219049
BLCA
ICGC
LGPFSE
LIG_APCC_ABBA_1
0.2778
p.G135S
DO50970
LICA
ICGC
LGPFSE
LIG_APCC_ABBA_1
0.0556
p.L126P
SIDM01682
Gastric Carcinoma
GDSC
LGPFSE
LIG_APCC_ABBA_1
0.3056
p.L126P
ACH-000110
Gastric Cancer
CCLE
LGPFSE
LIG_APCC_ABBA_1
0.3056
Drug responses associated with DNAJB2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGPFSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P25686
DnaJ homolog subfamily B member 2
LIG_APCC_ABBA_1
120:125
LGPFSE
APC,CDC20,FZR1
0.9367
More...