DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
LGPTPSRT
Uniprot ID:
Q13428
Source protein:
Treacle protein
Source gene:
TCOF1
Class:
DEG_SCF_FBW7_1
Location:
1172:1179
E3 ligase:
FBXW7
DEGRON score:
0.8241
ASA_SCORE:
95.9875
COIL:
0.9544
CONS_SCORE:
0.3576
DSS_SCORE:
0.734
HELIX:
0.0226
FCONS_SCORE:
0.9284
RIG_SCORE:
0.6014
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1166T
TCGA-85-7844
LUSC
TCGA
LGPTPSRT
DEG_SCF_FBW7_1
0.1667
p.Q1164H
TCGA-D1-A2G0
UCEC
TCGA
LGPTPSRT
DEG_SCF_FBW7_1
0.1111
p.P1176S
TCGA-D6-6516
HNSC
TCGA
LGPTPSRT
DEG_SCF_FBW7_1
0.6752
p.P1176S
TCGA-EB-A431
SKCM
TCGA
LGPTPSRT
DEG_SCF_FBW7_1
0.6752
p.P1176S
TCGA-FS-A4F5
SKCM
TCGA
LGPTPSRT
DEG_SCF_FBW7_1
0.6752
p.P1177R
DO230550
LUSC
ICGC
LGPTPSRT
DEG_SCF_FBW7_1
0.7512
p.S1162F
DO37567
SKCM
ICGC
LGPTPSRT
DEG_SCF_FBW7_1
0.0556
p.T1171M
SIDM00602
Gastric Carcinoma
GDSC
LGPTPSRT
DEG_SCF_FBW7_1
0.75
p.T1171M
IM-95
stomach
COSMIC
LGPTPSRT
DEG_SCF_FBW7_1
0.75
p.T1175I
ACH-000162
Lymphoma
CCLE
LGPTPSRT
DEG_SCF_FBW7_1
0.8189
p.T1175I
GA-10
haematopoietic_and_lymphoid_tissue
COSMIC
LGPTPSRT
DEG_SCF_FBW7_1
0.8189
p.S1164F
MOG-G-CCM
central_nervous_system
COSMIC
LGPTPSRT
DEG_SCF_FBW7_1
0.1111
p.S1163F
MOG-G-CCM
central_nervous_system
COSMIC
LGPTPSRT
DEG_SCF_FBW7_1
0.0833
p.D1162E
HCC2998
large_intestine
COSMIC
LGPTPSRT
DEG_SCF_FBW7_1
0.0556
p.L1179F
OE19
oesophagus
COSMIC
LGPTPSRT
DEG_SCF_FBW7_1
0.6981
p.Q1175R
NCI-N87
stomach
COSMIC
LGPTPSRT
DEG_SCF_FBW7_1
0.7329
p.D1163E
HCC2998
large_intestine
COSMIC
LGPTPSRT
DEG_SCF_FBW7_1
0.0833
p.Q1174R
NCI-N87
stomach
COSMIC
LGPTPSRT
DEG_SCF_FBW7_1
0.7329
p.L1180F
OE19
oesophagus
COSMIC
LGPTPSRT
DEG_SCF_FBW7_1
0.3056
p.T1170M
IM-95
stomach
COSMIC
LGPTPSRT
DEG_SCF_FBW7_1
0.2778
p.T1174I
GA-10
haematopoietic_and_lymphoid_tissue
COSMIC
LGPTPSRT
DEG_SCF_FBW7_1
0.7078
Drug responses associated with TCOF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGPTPSRT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13428
Treacle protein
DEG_SCF_FBW7_1
1172:1179
LGPTPSRT
FBXW7
0.8241
More...