DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGQTPTKE
Uniprot ID:
P02585
Source protein:
Troponin C, skeletal muscle
Source gene:
TNNC2
Class:
DEG_SCF_FBW7_2
Location:
47:54
E3 ligase:
FBXW7
DEGRON score:
0.8884
ASA_SCORE:
75.6375
COIL:
0.7181
CONS_SCORE:
0.7253
DSS_SCORE:
0.3998
HELIX:
0.2648
FCONS_SCORE:
0.9463
RIG_SCORE:
0.7607
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V37I
TCGA-AX-A2HJ
UCEC
TCGA
LGQTPTKE
DEG_SCF_FBW7_2
0.0556
p.V37I
DO232761
PBCA
ICGC
LGQTPTKE
DEG_SCF_FBW7_2
0.0556
p.V37I
DO42105
UCEC
ICGC
LGQTPTKE
DEG_SCF_FBW7_2
0.0556
p.L40F
TCGA-D3-A2JC
SKCM
TCGA
LGQTPTKE
DEG_SCF_FBW7_2
0.1389
p.L40F
DO47578
SKCM
ICGC
LGQTPTKE
DEG_SCF_FBW7_2
0.1389
p.A58T
TCGA-EE-A29T
SKCM
TCGA
LGQTPTKE
DEG_SCF_FBW7_2
0.2222
p.A58T
DO37742
SKCM
ICGC
LGQTPTKE
DEG_SCF_FBW7_2
0.2222
p.R45T
TCGA-EE-A2GB
SKCM
TCGA
LGQTPTKE
DEG_SCF_FBW7_2
0.2778
p.R45T
DO222683
MELA
ICGC
LGQTPTKE
DEG_SCF_FBW7_2
0.2778
p.R45T
DO37417
SKCM
ICGC
LGQTPTKE
DEG_SCF_FBW7_2
0.2778
p.E54K
TCGA-FR-A726
SKCM
TCGA
LGQTPTKE
DEG_SCF_FBW7_2
0.7022
p.E54K
DO48665
SKCM
ICGC
LGQTPTKE
DEG_SCF_FBW7_2
0.7022
p.T42M
DO225175
BRCA
ICGC
LGQTPTKE
DEG_SCF_FBW7_2
0.6389
p.D57E
DO229025
LICA
ICGC
LGQTPTKE
DEG_SCF_FBW7_2
0.25
p.M46T
SIDM00337
Melanoma
GDSC
LGQTPTKE
DEG_SCF_FBW7_2
0.3056
p.M46T
ACH-000450
Skin Cancer
CCLE
LGQTPTKE
DEG_SCF_FBW7_2
0.3056
p.M46T
MEL-HO
skin
COSMIC
LGQTPTKE
DEG_SCF_FBW7_2
0.3056
p.G54V
OVISE
ovary
COSMIC
LGQTPTKE
DEG_SCF_FBW7_2
0.7532
Drug responses associated with TNNC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGQTPTKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P02585
Troponin C, skeletal muscle
DEG_SCF_FBW7_2
47:54
LGQTPTKE
FBXW7
0.8884
More...