DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGSTPLTS
Uniprot ID:
Q8NFH5
Source protein:
Nucleoporin NUP35
Source gene:
NUP35
Class:
DEG_SCF_FBW7_1
Location:
103:110
E3 ligase:
FBXW7
DEGRON score:
0.9988
ASA_SCORE:
68.6625
COIL:
0.8644
CONS_SCORE:
0.5147
DSS_SCORE:
0.6352
HELIX:
0.0808
FCONS_SCORE:
1.0129
RIG_SCORE:
0.6466
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P101L
TCGA-12-0829
GBM
TCGA
LGSTPLTS
DEG_SCF_FBW7_1
0.2778
p.I94V
TCGA-EE-A29D
SKCM
TCGA
LGSTPLTS
DEG_SCF_FBW7_1
0.0833
p.F120Y
DO48290
ESCA
ICGC
LGSTPLTS
DEG_SCF_FBW7_1
0.0556
p.G116V
DO229027
LICA
ICGC
LGSTPLTS
DEG_SCF_FBW7_1
0.1667
p.V109F
DO29046
OV
ICGC
LGSTPLTS
DEG_SCF_FBW7_1
0.7068
p.P113T
DO37951
SKCM
ICGC
LGSTPLTS
DEG_SCF_FBW7_1
0.25
p.P97T
DO229272
THCA
ICGC
LGSTPLTS
DEG_SCF_FBW7_1
0.1667
p.T110A
DO39016
THCA
ICGC
LGSTPLTS
DEG_SCF_FBW7_1
0.7139
p.S111P
DO42312
UCEC
ICGC
LGSTPLTS
DEG_SCF_FBW7_1
0.3056
p.Q117H
DO42312
UCEC
ICGC
LGSTPLTS
DEG_SCF_FBW7_1
0.1389
p.I116T
SIDM00878
Breast Carcinoma
GDSC
LGSTPLTS
DEG_SCF_FBW7_1
0.1667
p.I116T
ACH-000930
Breast Cancer
CCLE
LGSTPLTS
DEG_SCF_FBW7_1
0.1667
p.I116T
HCC1569
breast
COSMIC
LGSTPLTS
DEG_SCF_FBW7_1
0.1667
p.L108S
ACH-000982
Colon/Colorectal Cancer
CCLE
LGSTPLTS
DEG_SCF_FBW7_1
0.6556
p.I99T
HCC1569
breast
COSMIC
LGSTPLTS
DEG_SCF_FBW7_1
0.6667
Drug responses associated with NUP35 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGSTPLTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NFH5
Nucleoporin NUP35
DEG_SCF_FBW7_1
103:110
LGSTPLTS
FBXW7
0.9988
More...