DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGTPLKS
Uniprot ID:
O15018
Source protein:
PDZ domain-containing protein 2
Source gene:
PDZD2
Class:
DEG_SCF_FBW7_1
Location:
844:850
E3 ligase:
FBXW7
DEGRON score:
0.9946
ASA_SCORE:
82.3571
COIL:
0.9211
CONS_SCORE:
0.4193
DSS_SCORE:
0.5885
HELIX:
0.0239
FCONS_SCORE:
1.0136
RIG_SCORE:
0.6284
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L848F
DO228974
LICA
ICGC
LGTPLKS
DEG_SCF_FBW7_1
0.587
p.L848F
DO229045
LICA
ICGC
LGTPLKS
DEG_SCF_FBW7_1
0.587
p.P851S
DO220882
MELA
ICGC
LGTPLKS
DEG_SCF_FBW7_1
0.3056
p.G843V
SIDM00227
Neuroblastoma
GDSC
LGTPLKS
DEG_SCF_FBW7_1
0.3056
p.G843V
GI-ME-N
autonomic_ganglia
COSMIC
LGTPLKS
DEG_SCF_FBW7_1
0.3056
p.S841F
SIDM01699
Chondrosarcoma
GDSC
LGTPLKS
DEG_SCF_FBW7_1
0.25
p.S841F
ACH-000224
Non-Cancerous
CCLE
LGTPLKS
DEG_SCF_FBW7_1
0.25
p.A854E
TCGA-VR-A8EQ
ESCA
TCGA
LGTPLKS
DEG_SCF_FBW7_1
0.2222
p.N839I
DO229542
UTCA
ICGC
LGTPLKS
DEG_SCF_FBW7_1
0.1944
p.E834G
DO229221
THCA
ICGC
LGTPLKS
DEG_SCF_FBW7_1
0.0556
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Drug responses associated with PDZD2 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of LGTPLKS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
DEG_SCF_FBW7_1
844:850
LGTPLKS
FBXW7
0.9946
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