DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGTPLKS
Uniprot ID:
O15018
Source protein:
PDZ domain-containing protein 2
Source gene:
PDZD2
Class:
DEG_SCF_FBW7_1
Location:
844:850
E3 ligase:
FBXW7
DEGRON score:
0.9946
ASA_SCORE:
82.3571
COIL:
0.9211
CONS_SCORE:
0.4193
DSS_SCORE:
0.5885
HELIX:
0.0239
FCONS_SCORE:
1.0136
RIG_SCORE:
0.6284
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A854E
TCGA-VR-A8EQ
ESCA
TCGA
LGTPLKS
DEG_SCF_FBW7_1
0.2222
p.L848F
DO228974
LICA
ICGC
LGTPLKS
DEG_SCF_FBW7_1
0.587
p.L848F
DO229045
LICA
ICGC
LGTPLKS
DEG_SCF_FBW7_1
0.587
p.P851S
DO220882
MELA
ICGC
LGTPLKS
DEG_SCF_FBW7_1
0.3056
p.E834G
DO229221
THCA
ICGC
LGTPLKS
DEG_SCF_FBW7_1
0.0556
p.N839I
DO229542
UTCA
ICGC
LGTPLKS
DEG_SCF_FBW7_1
0.1944
p.G843V
SIDM00227
Neuroblastoma
GDSC
LGTPLKS
DEG_SCF_FBW7_1
0.3056
p.G843V
GI-ME-N
autonomic_ganglia
COSMIC
LGTPLKS
DEG_SCF_FBW7_1
0.3056
p.S841F
SIDM01699
Chondrosarcoma
GDSC
LGTPLKS
DEG_SCF_FBW7_1
0.25
p.S841F
ACH-000224
Non-Cancerous
CCLE
LGTPLKS
DEG_SCF_FBW7_1
0.25
Drug responses associated with PDZD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGTPLKS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
DEG_SCF_FBW7_1
844:850
LGTPLKS
FBXW7
0.9946
More...