DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGTPQRS
Uniprot ID:
Q14767
Source protein:
Latent-transforming growth factor beta-binding protein 2
Source gene:
LTBP2
Class:
DEG_SCF_FBW7_1
Location:
145:151
E3 ligase:
FBXW7
DEGRON score:
0.9875
ASA_SCORE:
100.3714
COIL:
0.9606
CONS_SCORE:
0.3608
DSS_SCORE:
0.83
HELIX:
0.0193
FCONS_SCORE:
0.9718
RIG_SCORE:
0.5923
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A154V
TCGA-DK-A2I4
BLCA
TCGA
LGTPQRS
DEG_SCF_FBW7_1
0.25
p.A154V
DO465
BLCA
ICGC
LGTPQRS
DEG_SCF_FBW7_1
0.25
p.G152V
TCGA-ER-A19T
SKCM
TCGA
LGTPQRS
DEG_SCF_FBW7_1
0.3056
p.G152V
DO51251
SKCM
ICGC
LGTPQRS
DEG_SCF_FBW7_1
0.3056
p.A139T
TCGA-SJ-A6ZI
UCEC
TCGA
LGTPQRS
DEG_SCF_FBW7_1
0.1667
p.A139T
DO219784
UCEC
ICGC
LGTPQRS
DEG_SCF_FBW7_1
0.1667
p.P155S
DO233628
GACA
ICGC
LGTPQRS
DEG_SCF_FBW7_1
0.2222
p.P158L
DO233791
GACA
ICGC
LGTPQRS
DEG_SCF_FBW7_1
0.1389
p.P158Q
DO229028
LICA
ICGC
LGTPQRS
DEG_SCF_FBW7_1
0.1389
p.P158Q
DO229006
LICA
ICGC
LGTPQRS
DEG_SCF_FBW7_1
0.1389
p.T157P
DO219881
SKCA
ICGC
LGTPQRS
DEG_SCF_FBW7_1
0.1667
p.T157P
ACH-001331
Head and Neck Cancer
CCLE
LGTPQRS
DEG_SCF_FBW7_1
0.1667
p.R135Q
DO229272
THCA
ICGC
LGTPQRS
DEG_SCF_FBW7_1
0.0556
p.R137L
SIDM01070
Non-Small Cell Lung Carcinoma
GDSC
LGTPQRS
DEG_SCF_FBW7_1
0.1111
p.R137L
ACH-000840
Lung Cancer
CCLE
LGTPQRS
DEG_SCF_FBW7_1
0.1111
p.R137L
HCC-366
lung
COSMIC
LGTPQRS
DEG_SCF_FBW7_1
0.1111
p.A139V
ACH-000581
Gastric Cancer
CCLE
LGTPQRS
DEG_SCF_FBW7_1
0.1667
p.A139V
NCI-SNU-16
stomach
COSMIC
LGTPQRS
DEG_SCF_FBW7_1
0.1667
p.P140S
ACH-001719
Ovarian Cancer
CCLE
LGTPQRS
DEG_SCF_FBW7_1
0.1944
Drug responses associated with LTBP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGTPQRS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14767
Latent-transforming growth factor beta-binding protein 2
DEG_SCF_FBW7_1
145:151
LGTPQRS
FBXW7
0.9875
More...