DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGTPRLT
Uniprot ID:
Q9UN66
Source protein:
Protocadherin beta-8
Source gene:
PCDHB8
Class:
DEG_SCF_FBW7_1
Location:
427:433
E3 ligase:
FBXW7
DEGRON score:
0.8817
ASA_SCORE:
73.1143
COIL:
0.861
CONS_SCORE:
0.694
DSS_SCORE:
0.2378
HELIX:
0.008
FCONS_SCORE:
1.0556
RIG_SCORE:
0.7894
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V420I
TCGA-AA-A010
COAD
TCGA
LGTPRLT
DEG_SCF_FBW7_1
0.1389
p.V420I
TCGA-AD-6895
COAD
TCGA
LGTPRLT
DEG_SCF_FBW7_1
0.1389
p.V420I
TCGA-G4-6309
COAD
TCGA
LGTPRLT
DEG_SCF_FBW7_1
0.1389
p.V420I
DO7810
COAD
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.1389
p.V420I
DO8938
COAD
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.1389
p.N437Y
TCGA-AO-A1KR
BRCA
TCGA
LGTPRLT
DEG_SCF_FBW7_1
0.2222
p.N437Y
DO4209
BRCA
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.2222
p.T421I
TCGA-AP-A051
UCEC
TCGA
LGTPRLT
DEG_SCF_FBW7_1
0.1667
p.T421I
DO42673
UCEC
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.1667
p.R431M
TCGA-AP-A059
UCEC
TCGA
LGTPRLT
DEG_SCF_FBW7_1
0.7521
p.R431M
DO41361
UCEC
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.7521
p.V440M
TCGA-AP-A1DV
UCEC
TCGA
LGTPRLT
DEG_SCF_FBW7_1
0.1389
p.V440M
DO222804
COCA
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.1389
p.V440M
DO234394
ESAD
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.1389
p.V440M
DO43186
UCEC
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.1389
p.R431S
TCGA-CV-5966
HNSC
TCGA
LGTPRLT
DEG_SCF_FBW7_1
0.6316
p.R431S
DO234205
ESAD
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.6316
p.R431S
DO14950
HNSC
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.6316
p.I422F
TCGA-EB-A44P
SKCM
TCGA
LGTPRLT
DEG_SCF_FBW7_1
0.1944
p.I422F
DO47525
SKCM
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.1944
p.L432P
TCGA-ER-A193
SKCM
TCGA
LGTPRLT
DEG_SCF_FBW7_1
0.6471
p.L432P
DO47368
SKCM
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.6471
p.M438V
TCGA-GN-A26C
SKCM
TCGA
LGTPRLT
DEG_SCF_FBW7_1
0.1944
p.M438V
DO37782
SKCM
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.1944
p.T439I
TCGA-IB-7651
PAAD
TCGA
LGTPRLT
DEG_SCF_FBW7_1
0.1667
p.T439I
DO46657
PAAD
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.1667
p.L427V
DO234309
ESAD
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.5654
p.L427V
DO234292
ESAD
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.5654
p.G428E
DO222632
MELA
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.6087
p.G428E
DO229456
SKCA
ICGC
LGTPRLT
DEG_SCF_FBW7_1
0.6087
p.V424I
SIDM02049
Pancreatic Carcinoma
GDSC
LGTPRLT
DEG_SCF_FBW7_1
0.25
p.V424I
SIDM01301
Esophageal Carcinoma
GDSC
LGTPRLT
DEG_SCF_FBW7_1
0.25
p.V424I
SIDM01955
Colorectal Carcinoma
GDSC
LGTPRLT
DEG_SCF_FBW7_1
0.25
p.T429S
SIDM00683
Prostate Carcinoma
GDSC
LGTPRLT
DEG_SCF_FBW7_1
0.8227
p.T429S
LNCaP-Clone-FGC
prostate
COSMIC
LGTPRLT
DEG_SCF_FBW7_1
0.8227
p.T439N
SIDM01001
Breast Carcinoma
GDSC
LGTPRLT
DEG_SCF_FBW7_1
0.1667
p.T439N
DU-4475
breast
COSMIC
LGTPRLT
DEG_SCF_FBW7_1
0.1667
Drug responses associated with PCDHB8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGTPRLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UN66
Protocadherin beta-8
DEG_SCF_FBW7_1
427:433
LGTPRLT
FBXW7
0.8817
More...