DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGTPSDE
Uniprot ID:
Q6ZNA4
Source protein:
E3 ubiquitin-protein ligase Arkadia
Source gene:
RNF111
Class:
DEG_SCF_FBW7_2
Location:
122:128
E3 ligase:
FBXW7
DEGRON score:
0.9893
ASA_SCORE:
99
COIL:
0.9537
CONS_SCORE:
0.4492
DSS_SCORE:
0.592
HELIX:
0.0276
FCONS_SCORE:
1.0498
RIG_SCORE:
0.6427
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D136A
TCGA-VQ-A8P2
STAD
TCGA
LGTPSDE
DEG_SCF_FBW7_2
0.1111
p.D136A
DO51761
STAD
ICGC
LGTPSDE
DEG_SCF_FBW7_2
0.1111
p.S135I
DO228939
LICA
ICGC
LGTPSDE
DEG_SCF_FBW7_2
0.1389
p.N112D
DO231760
LINC
ICGC
LGTPSDE
DEG_SCF_FBW7_2
0.0556
Drug responses associated with RNF111 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGTPSDE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZNA4
E3 ubiquitin-protein ligase Arkadia
DEG_SCF_FBW7_2
122:128
LGTPSDE
FBXW7
0.9893
More...