DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGTPSDT
Uniprot ID:
Q96NA8
Source protein:
t-SNARE domain-containing protein 1
Source gene:
TSNARE1
Class:
DEG_SCF_FBW7_1
Location:
285:291
E3 ligase:
FBXW7
DEGRON score:
0.9922
ASA_SCORE:
61.0714
COIL:
0.8244
CONS_SCORE:
0.6686
DSS_SCORE:
0.5608
HELIX:
0.1536
FCONS_SCORE:
1.1504
RIG_SCORE:
0.644
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q292H
TCGA-85-6561
LUSC
TCGA
LGTPSDT
DEG_SCF_FBW7_1
0.3056
p.L282I
TCGA-AX-A06F
UCEC
TCGA
LGTPSDT
DEG_SCF_FBW7_1
0.25
p.L282I
DO41752
UCEC
ICGC
LGTPSDT
DEG_SCF_FBW7_1
0.25
p.R280W
TCGA-AX-A1CE
UCEC
TCGA
LGTPSDT
DEG_SCF_FBW7_1
0.1944
p.R280W
TCGA-BR-8382
STAD
TCGA
LGTPSDT
DEG_SCF_FBW7_1
0.1944
p.R280W
DO47925
STAD
ICGC
LGTPSDT
DEG_SCF_FBW7_1
0.1944
p.R280W
DO42280
UCEC
ICGC
LGTPSDT
DEG_SCF_FBW7_1
0.1944
p.R280W
SIDM00850
Gastric Carcinoma
GDSC
LGTPSDT
DEG_SCF_FBW7_1
0.1944
p.R280W
AGS
stomach
COSMIC
LGTPSDT
DEG_SCF_FBW7_1
0.1944
p.R295W
TCGA-D3-A8GM
SKCM
TCGA
LGTPSDT
DEG_SCF_FBW7_1
0.2222
p.L278F
TCGA-DU-7294
LGG
TCGA
LGTPSDT
DEG_SCF_FBW7_1
0.1389
p.P288Q
TCGA-ER-A19H
SKCM
TCGA
LGTPSDT
DEG_SCF_FBW7_1
0.7035
p.T287K
DO229022
LICA
ICGC
LGTPSDT
DEG_SCF_FBW7_1
0.7306
p.P288L
SIDM00746
Non-Small Cell Lung Carcinoma
GDSC
LGTPSDT
DEG_SCF_FBW7_1
0.7582
p.P288L
SIDM01086
B-Lymphoblastic Leukemia
GDSC
LGTPSDT
DEG_SCF_FBW7_1
0.7582
p.L282R
SIDM00296
Small Cell Lung Carcinoma
GDSC
LGTPSDT
DEG_SCF_FBW7_1
0.25
p.L282R
ACH-002051
Lung Cancer
CCLE
LGTPSDT
DEG_SCF_FBW7_1
0.25
p.L282R
LU-134-A
lung
COSMIC
LGTPSDT
DEG_SCF_FBW7_1
0.25
Drug responses associated with TSNARE1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGTPSDT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96NA8
t-SNARE domain-containing protein 1
DEG_SCF_FBW7_1
285:291
LGTPSDT
FBXW7
0.9922
More...