DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LGVFNE
Uniprot ID:
Q6PL18
Source protein:
ATPase family AAA domain-containing protein 2
Source gene:
ATAD2
Class:
LIG_APCC_ABBA_1
Location:
205:210
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9006
ASA_SCORE:
101.0167
COIL:
0.7797
CONS_SCORE:
0.217
DSS_SCORE:
0.4873
HELIX:
0.195
FCONS_SCORE:
0.8987
RIG_SCORE:
0.7349
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R195C
TCGA-4R-AA8I
LIHC
TCGA
LGVFNE
LIG_APCC_ABBA_1
0.0556
p.R195C
TCGA-AX-A06F
UCEC
TCGA
LGVFNE
LIG_APCC_ABBA_1
0.0556
p.R195C
TCGA-EO-A3B0
UCEC
TCGA
LGVFNE
LIG_APCC_ABBA_1
0.0556
p.R195C
DO49657
LIHC
ICGC
LGVFNE
LIG_APCC_ABBA_1
0.0556
p.R195C
DO219773
UCEC
ICGC
LGVFNE
LIG_APCC_ABBA_1
0.0556
p.R195C
DO41752
UCEC
ICGC
LGVFNE
LIG_APCC_ABBA_1
0.0556
p.R195C
SIDM00948
Burkitt's Lymphoma
GDSC
LGVFNE
LIG_APCC_ABBA_1
0.0556
p.R195C
DG-75
haematopoietic_and_lymphoid_tissue
COSMIC
LGVFNE
LIG_APCC_ABBA_1
0.0556
p.R195L
TCGA-64-1679
LUAD
TCGA
LGVFNE
LIG_APCC_ABBA_1
0.0556
p.R195L
DO26200
LUAD
ICGC
LGVFNE
LIG_APCC_ABBA_1
0.0556
p.N209K
TCGA-AB-2834
LAML
TCGA
LGVFNE
LIG_APCC_ABBA_1
0.5806
p.N209K
DO21749
LAML
ICGC
LGVFNE
LIG_APCC_ABBA_1
0.5806
p.E203K
TCGA-C8-A26Y
BRCA
TCGA
LGVFNE
LIG_APCC_ABBA_1
0.2778
p.E203K
DO1273
BRCA
ICGC
LGVFNE
LIG_APCC_ABBA_1
0.2778
p.E203Q
TCGA-GC-A3WC
BLCA
TCGA
LGVFNE
LIG_APCC_ABBA_1
0.2778
p.E203Q
DO755
BLCA
ICGC
LGVFNE
LIG_APCC_ABBA_1
0.2778
p.T211P
TCGA-VQ-A91X
STAD
TCGA
LGVFNE
LIG_APCC_ABBA_1
0.75
p.T211P
DO51790
STAD
ICGC
LGVFNE
LIG_APCC_ABBA_1
0.75
p.D204E
DO229041
LICA
ICGC
LGVFNE
LIG_APCC_ABBA_1
0.3056
p.L202I
DO229045
LICA
ICGC
LGVFNE
LIG_APCC_ABBA_1
0.25
p.V207M
SIDM00250
Esophageal Squamous Cell Carcinoma
GDSC
LGVFNE
LIG_APCC_ABBA_1
0.6097
p.V207M
ACH-000917
Esophageal Cancer
CCLE
LGVFNE
LIG_APCC_ABBA_1
0.6097
p.V207M
TE-4
oesophagus
COSMIC
LGVFNE
LIG_APCC_ABBA_1
0.6097
p.R198Q
SIDM00929
Chondrosarcoma
GDSC
LGVFNE
LIG_APCC_ABBA_1
0.1389
p.R198Q
CAL-78
bone
COSMIC
LGVFNE
LIG_APCC_ABBA_1
0.1389
Drug responses associated with ATAD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LGVFNE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6PL18
ATPase family AAA domain-containing protein 2
LIG_APCC_ABBA_1
205:210
LGVFNE
APC,CDC20,FZR1
0.9006
More...