DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LHLFPE
Uniprot ID:
A1L4K1
Source protein:
Fibronectin type III and SPRY domain-containing protein 2
Source gene:
FSD2
Class:
LIG_APCC_ABBA_1
Location:
33:38
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9973
ASA_SCORE:
77.3667
COIL:
0.7087
CONS_SCORE:
0.3752
DSS_SCORE:
0.4081
HELIX:
0.2277
FCONS_SCORE:
1.082
RIG_SCORE:
0.7893
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D25E
TCGA-60-2714
LUSC
TCGA
LHLFPE
LIG_APCC_ABBA_1
0.1111
p.D25E
DO26530
LUSC
ICGC
LHLFPE
LIG_APCC_ABBA_1
0.1111
p.V47I
TCGA-90-A4ED
LUSC
TCGA
LHLFPE
LIG_APCC_ABBA_1
0.0833
p.V47I
DO45482
LUSC
ICGC
LHLFPE
LIG_APCC_ABBA_1
0.0833
p.E30K
TCGA-A6-2686
COAD
TCGA
LHLFPE
LIG_APCC_ABBA_1
0.25
p.E30K
TCGA-VS-A8QC
CESC
TCGA
LHLFPE
LIG_APCC_ABBA_1
0.25
p.E30K
DO51628
CESC
ICGC
LHLFPE
LIG_APCC_ABBA_1
0.25
p.E30K
DO7828
COAD
ICGC
LHLFPE
LIG_APCC_ABBA_1
0.25
p.M43I
TCGA-CN-5369
HNSC
TCGA
LHLFPE
LIG_APCC_ABBA_1
0.1944
p.M43I
DO16069
HNSC
ICGC
LHLFPE
LIG_APCC_ABBA_1
0.1944
p.H34N
SIDM01020
Plasma Cell Myeloma
GDSC
LHLFPE
LIG_APCC_ABBA_1
0.6312
p.H34N
ACH-000380
Myeloma
CCLE
LHLFPE
LIG_APCC_ABBA_1
0.6312
p.H34N
KMS-12-BM
haematopoietic_and_lymphoid_tissue
COSMIC
LHLFPE
LIG_APCC_ABBA_1
0.6312
p.D31A
SIDM00217
Colorectal Carcinoma
GDSC
LHLFPE
LIG_APCC_ABBA_1
0.2778
p.D31A
ACH-000999
Colon/Colorectal Cancer
CCLE
LHLFPE
LIG_APCC_ABBA_1
0.2778
p.D31A
SNU-1040
large_intestine
COSMIC
LHLFPE
LIG_APCC_ABBA_1
0.2778
p.M43L
SIDM01372
Pancreatic Carcinoma
GDSC
LHLFPE
LIG_APCC_ABBA_1
0.1944
p.M43L
ACH-000266
Pancreatic Cancer
CCLE
LHLFPE
LIG_APCC_ABBA_1
0.1944
Drug responses associated with FSD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LHLFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A1L4K1
Fibronectin type III and SPRY domain-containing protein 2
LIG_APCC_ABBA_1
33:38
LHLFPE
APC,CDC20,FZR1
0.9973
More...