DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LHLHPD
Uniprot ID:
Q8WUS8
Source protein:
Short-chain dehydrogenase/reductase family 42E member 1
Source gene:
SDR42E1
Class:
LIG_APCC_ABBA_1
Location:
145:150
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9776
ASA_SCORE:
71.9167
COIL:
0.8345
CONS_SCORE:
0.3276
DSS_SCORE:
0.3331
HELIX:
0.1572
FCONS_SCORE:
0.6106
RIG_SCORE:
0.742
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D150N
TCGA-D9-A6EC
SKCM
TCGA
LHLHPD
LIG_APCC_ABBA_1
0.6932
p.D150N
DO50291
SKCM
ICGC
LHLHPD
LIG_APCC_ABBA_1
0.6932
p.T155K
DO229034
LICA
ICGC
LHLHPD
LIG_APCC_ABBA_1
0.6389
p.L147I
DO229041
LICA
ICGC
LHLHPD
LIG_APCC_ABBA_1
0.6063
p.H151Y
TCGA-FW-A3R5
SKCM
TCGA
LHLHPD
LIG_APCC_ABBA_1
0.3056
p.H151Y
DO37406
SKCM
ICGC
LHLHPD
LIG_APCC_ABBA_1
0.3056
p.P144T
DO229035
LICA
ICGC
LHLHPD
LIG_APCC_ABBA_1
0.3056
p.Y142C
SIDM01767
Squamous Cell Lung Carcinoma
GDSC
LHLHPD
LIG_APCC_ABBA_1
0.25
p.Y142C
ACH-000553
Lung Cancer
CCLE
LHLHPD
LIG_APCC_ABBA_1
0.25
p.R154W
TCGA-DA-A1HY
SKCM
TCGA
LHLHPD
LIG_APCC_ABBA_1
0.2222
p.R154W
DO233267
GACA
ICGC
LHLHPD
LIG_APCC_ABBA_1
0.2222
p.R154W
DO222647
MELA
ICGC
LHLHPD
LIG_APCC_ABBA_1
0.2222
p.R154W
DO37409
SKCM
ICGC
LHLHPD
LIG_APCC_ABBA_1
0.2222
p.E138A
TCGA-AJ-A3EL
UCEC
TCGA
LHLHPD
LIG_APCC_ABBA_1
0.1389
p.E138A
DO41542
UCEC
ICGC
LHLHPD
LIG_APCC_ABBA_1
0.1389
p.G136R
TCGA-D3-A2JO
SKCM
TCGA
LHLHPD
LIG_APCC_ABBA_1
0.0833
p.G136R
DO47619
SKCM
ICGC
LHLHPD
LIG_APCC_ABBA_1
0.0833
p.E160K
DO220882
MELA
ICGC
LHLHPD
LIG_APCC_ABBA_1
0.0556
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Drug responses associated with SDR42E1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of LHLHPD
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WUS8
Short-chain dehydrogenase/reductase family 42E member 1
LIG_APCC_ABBA_1
145:150
LHLHPD
APC,CDC20,FZR1
0.9776
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