DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
LHPFME
Uniprot ID:
O95390
Source protein:
Growth/differentiation factor 11
Source gene:
GDF11
Class:
LIG_APCC_ABBA_1
Location:
281:286
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7816
ASA_SCORE:
69.3833
COIL:
0.5185
CONS_SCORE:
0.579
DSS_SCORE:
0.4167
HELIX:
0.0475
FCONS_SCORE:
1.2366
RIG_SCORE:
0.8049
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P276L
TCGA-BL-A5ZZ
BLCA
TCGA
LHPFME
LIG_APCC_ABBA_1
0.1944
p.P276L
TCGA-C4-A0F6
BLCA
TCGA
LHPFME
LIG_APCC_ABBA_1
0.1944
p.P276L
DO44027
BLCA
ICGC
LHPFME
LIG_APCC_ABBA_1
0.1944
p.P276L
DO508
BLCA
ICGC
LHPFME
LIG_APCC_ABBA_1
0.1944
p.N292K
TCGA-GV-A3QI
BLCA
TCGA
LHPFME
LIG_APCC_ABBA_1
0.1667
p.N292K
DO470
BLCA
ICGC
LHPFME
LIG_APCC_ABBA_1
0.1667
p.G277A
TCGA-PQ-A6FI
BLCA
TCGA
LHPFME
LIG_APCC_ABBA_1
0.2222
p.G277A
DO48524
BLCA
ICGC
LHPFME
LIG_APCC_ABBA_1
0.2222
p.E286V
SIDM02056
Pancreatic Carcinoma
GDSC
LHPFME
LIG_APCC_ABBA_1
0.7693
p.M285T
SIDM00496
Thyroid Gland Carcinoma
GDSC
LHPFME
LIG_APCC_ABBA_1
0.6312
p.M285T
ACH-001350
Thyroid Cancer
CCLE
LHPFME
LIG_APCC_ABBA_1
0.6312
p.M285T
HTC-C3
thyroid
COSMIC
LHPFME
LIG_APCC_ABBA_1
0.6312
p.V271A
SIDM00238
Ovarian Carcinoma
GDSC
LHPFME
LIG_APCC_ABBA_1
0.0556
p.V271A
ACH-000947
Ovarian Cancer
CCLE
LHPFME
LIG_APCC_ABBA_1
0.0556
p.V271A
OVK-18
ovary
COSMIC
LHPFME
LIG_APCC_ABBA_1
0.0556
Drug responses associated with GDF11 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of LHPFME
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95390
Growth/differentiation factor 11
LIG_APCC_ABBA_1
281:286
LHPFME
APC,CDC20,FZR1
0.7816
More...